Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_6857 |
Symbol | |
ID | 8549276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 9392221 |
End bp | 9392814 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 646391517 |
Product | Superoxide dismutase |
Protein accession | YP_003271214 |
Protein GI | 262200005 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0605] Superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0552512 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTCG AACTACCGAA ACTCCCCTAC GCCGAAGACG CTCTCGAGCC CCACATCTCG AAAGAGACGA TCCAGTACCA CTACGGGAAG CATCATCAGG GCTACGTCAA CAAGGTCAAC GCCGCGGTCG AGAACACGCC CAACGCCGAC CTGAGCATCG ACGAGCTGGT GCGCAAGGTG GCCGGCGACG CCGGCTCGAA GAAGCTGTTC AACAGCGCCG CCCAGGTGTG GAACCACACC TTTTACTGGA ACTGCCTGTC GCCCAACGGC GGCGGCGAGC CCACGGGTGC CATCGCCGAG GCCATCAACA AGTCCTTCGG CAGCTTCGCC GACTTCAAGA GCAAGTTCTC GGACGCGGCC GCCGGTCAGT TCGGCAGCGG CTGGGCCTGG CTGATCAAGG GCGATGACGG CGGCGTCTCC ATCGTCACCA CCAGCGACGC CGAGACCCCG ATGGCCGAGG GCAAGACCTG CGTCCTCACC ATCGACGTCT GGGAGCACGC CTACTACGTC GATTACCGGA ACGCCCGTCC GAAGTACATC GAGGCCTTCT GGAACATCGT CAACTGGGAC TTCGTCAACC AGCAGCTCGC CTAG
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Protein sequence | MAFELPKLPY AEDALEPHIS KETIQYHYGK HHQGYVNKVN AAVENTPNAD LSIDELVRKV AGDAGSKKLF NSAAQVWNHT FYWNCLSPNG GGEPTGAIAE AINKSFGSFA DFKSKFSDAA AGQFGSGWAW LIKGDDGGVS IVTTSDAETP MAEGKTCVLT IDVWEHAYYV DYRNARPKYI EAFWNIVNWD FVNQQLA
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