Gene Hoch_6857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6857 
Symbol 
ID8549276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9392221 
End bp9392814 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content63% 
IMG OID646391517 
ProductSuperoxide dismutase 
Protein accessionYP_003271214 
Protein GI262200005 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0552512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCG AACTACCGAA ACTCCCCTAC GCCGAAGACG CTCTCGAGCC CCACATCTCG 
AAAGAGACGA TCCAGTACCA CTACGGGAAG CATCATCAGG GCTACGTCAA CAAGGTCAAC
GCCGCGGTCG AGAACACGCC CAACGCCGAC CTGAGCATCG ACGAGCTGGT GCGCAAGGTG
GCCGGCGACG CCGGCTCGAA GAAGCTGTTC AACAGCGCCG CCCAGGTGTG GAACCACACC
TTTTACTGGA ACTGCCTGTC GCCCAACGGC GGCGGCGAGC CCACGGGTGC CATCGCCGAG
GCCATCAACA AGTCCTTCGG CAGCTTCGCC GACTTCAAGA GCAAGTTCTC GGACGCGGCC
GCCGGTCAGT TCGGCAGCGG CTGGGCCTGG CTGATCAAGG GCGATGACGG CGGCGTCTCC
ATCGTCACCA CCAGCGACGC CGAGACCCCG ATGGCCGAGG GCAAGACCTG CGTCCTCACC
ATCGACGTCT GGGAGCACGC CTACTACGTC GATTACCGGA ACGCCCGTCC GAAGTACATC
GAGGCCTTCT GGAACATCGT CAACTGGGAC TTCGTCAACC AGCAGCTCGC CTAG
 
Protein sequence
MAFELPKLPY AEDALEPHIS KETIQYHYGK HHQGYVNKVN AAVENTPNAD LSIDELVRKV 
AGDAGSKKLF NSAAQVWNHT FYWNCLSPNG GGEPTGAIAE AINKSFGSFA DFKSKFSDAA
AGQFGSGWAW LIKGDDGGVS IVTTSDAETP MAEGKTCVLT IDVWEHAYYV DYRNARPKYI
EAFWNIVNWD FVNQQLA