Gene Hoch_6614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6614 
Symbol 
ID8549031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9069191 
End bp9070375 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content67% 
IMG OID646391274 
Product2-amino-3-ketobutyrate coenzyme A ligase 
Protein accessionYP_003270973 
Protein GI262199764 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0794675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAC AAGCGAAGTC GCATTTTCGA GAGGTGCTCG ACGAGATTCG CGATGCCGGC 
CTGTGGAAGC ACGAGCGCAT CATCACCTCG CCGCAGGGGG ACGAGATCTC GGTGGGCGAG
CGCACCGTCG TCAACTTCTG CGCCAACAAC TACCTGGGCC TGTCGAGCGA CCAGCGCGTC
ATCGAAGCCG CCCGCGGCGC CCTCGATGAA CGCGGCTACG GGCTGTCGAG CGTGCGCTTC
ATCTGCGGCA CGCAGGATCG TCACAAGGAG CTCGAGGCCG CGCTCTCGAC CTTCCTGGGC
ATGGAGGACA CCATCCTCTA CACCTCGTGC TTCGACGCCA ACGGCGGTCT GTTCGAGACC
CTGCTCGGGC CCGAGGACGC GATCATCTCC GACGAGCTCA ACCACGCCTC GATCATCGAC
GGTATCCGCC TGTGCAAGGC CAAGCGATAT CGCTACCGCA ACGACGACCT CGCGCACCTC
GAGGAGCTGC TCAAGGAGTC GCAGTCGGCG CGCATGCGGC TCATCGCCAC CGACGGCGTG
TTCAGCATGG ACGGCACGAT CGCCCGCCTG GACGAAATCT GCGACCTCGC CGATAAGTAC
GGCGCGATGG TCATGGTCGA CGACAGCCAC GCCACCGGCT TCGTCGGCAA GACCGGGCGC
GGCACGCACG AGTATCGCGC GTGTATGGAG CGCGTGGACA TCATCACCTC GACCCTGGGC
AAGGCGCTGG GCGGCGCCTC GGGCGGCTTC ACCAGCGCGC GCAAGGAGAT CGTCGATCTG
CTGCGCAACC GCTCGCGCCC GTACCTGTTC AGCAACACCC TGGCGCCGCC GATCGTGGCC
GGCAGCCTGG CCGCGGTGGC GCTGCTGAGC GAGAGCACCG AGCTGCGCGA TCGCCTGGAG
GACAACACCA AGCGCTTCCG CGAGGGCATG AGCGCGGCCG GCTTCGCCAT CCGCCCGGGC
GACCACGCGA TCGTGCCGAT CATGCTCGGC GAGGCGCAGA TCGCGGTGCA GATGGCAGAC
GCGCTGCTCG AGGAGGGCAT CTACGTGATC GGCTTCAGCT ACCCGGTGGT GCCCAAGGGC
AAGGCGCGCA TCCGCGTGCA GCTCTCGGCC GCGCACTCGG CCGAAGAAGT CGATCGCGCG
ATCGCGGCCT TCACCGCGGT CGGCAAGCGC CTGGGCGTGC TGTAG
 
Protein sequence
MFEQAKSHFR EVLDEIRDAG LWKHERIITS PQGDEISVGE RTVVNFCANN YLGLSSDQRV 
IEAARGALDE RGYGLSSVRF ICGTQDRHKE LEAALSTFLG MEDTILYTSC FDANGGLFET
LLGPEDAIIS DELNHASIID GIRLCKAKRY RYRNDDLAHL EELLKESQSA RMRLIATDGV
FSMDGTIARL DEICDLADKY GAMVMVDDSH ATGFVGKTGR GTHEYRACME RVDIITSTLG
KALGGASGGF TSARKEIVDL LRNRSRPYLF SNTLAPPIVA GSLAAVALLS ESTELRDRLE
DNTKRFREGM SAAGFAIRPG DHAIVPIMLG EAQIAVQMAD ALLEEGIYVI GFSYPVVPKG
KARIRVQLSA AHSAEEVDRA IAAFTAVGKR LGVL