| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6611 |
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| Symbol | |
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| ID | 8549028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 9064379 |
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| End bp | 9066568 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646391271 |
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| Product | helicase c2 |
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| Protein accession | YP_003270970 |
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| Protein GI | 262199761 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | [TIGR01407] DnaQ family exonuclease/DinG family helicase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0933933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTTCGG ACATCGCGTC CCACGCCGGG CTCAGCGTCG AGCGCGTGCT CGGACCGAGC
GGCATCCTGC GCGCGTGCAC GCCGCACTAC GAGGACCGTC CCGAGCAGCG GCACATGGCC
CACGCCGTGG CCGAGGCGCT CGCGCACCAG GGCGCGCTGC TGGTCGAGGC CGGCACCGGC
ACCGGCAAGA CCCTGGCGTA TCTCGTGCCG GCGCTGCTCA GCGGCAAGCG CGTGGTCATC
TCGACCGGGA CGCGCGCGCT CCAGGATCAG ATCACGCGCA ACGACATCCC GCTGCTCGAG
GAGATCCTGC CGCGGCAGTT CACGGCGGTG ACGCTCAAGG GCGTGTCCAA CTACGTGTGC
GTGCGCAAGC TGTGGGACGT GTCCGCGCGT CTGGCCATGG CGCCCGAGGC CCGCCGCGAC
TACCAGACCG TGGCCGAGTG GGCGCGCGAC AGCCCCACCG GCGACCGCGC CGAGCTCACC
GCGGTCGCCG ACGACGCGCC CATCTGGGCC GCGCTGACCA ACACGCCCGA CACCCGCATC
GGCCCGCGCT GCCCGTTCTT CGAGCAGTGC TTCATCACCC GCGCGCGCCG CCGGGCCGAA
AAAGCCGACC TCATCATCGT CAACCATCAC CTGTTCTTCG CCGATCTCTC GCTGCGCTCG
AGCTATCCCG GCGCGCGCGT GCTGCCCGAG TACGAGGCCG TGGTCTTCGA CGAGGCCCAC
CAGCTCGAGG ACGTGATGAC CGAGCACTTC GGCGTCCAGG TATCGACCGT GCGCCTGGCC
CAGCTCGCGC GCGACGCCCG CCACAGCAGC GCCGGCCGCA ACGGGCCGCT ATTTCCGAAC
GCCCAGTCGT CCGAAAAAGC CAGCGACGAT GACGATAGCC CAAAACCGTC CACCCGTCCG
ATGGAGACCT CGACCGAGCG CATCATCGCC CACCTCGAGC GCTGCGCCGA GGGCTTCTTC
ATCAGCGTGC GCGCGGCCCT GCGCGAATCG CCGGCCGGCG ACGGCGGCCG GGTGCCGCTC
GACGACTCGC TGTTTGCCGA CAGCGACCGC CAGGAGGCCT GGTTTCGCCT CGATAGCGCC
CTCGACGAGC TGGCCGCCCA CGCCACCCTG CGCGCCGACG AGCTGGCCAG CGACAGCGCC
GAGGCCGCCG CCTACGCGAT CGGCGAGGAC AACCCGGGCA ACGCCGACGA GCGCGCCGAA
GCCCTGGCCG CGGTCGCCGT CCGCGCCGAG ATGCTGCGCG GCGATCTCGC CCTGCTGGCC
GAGCGCAGCG AGCGCGCCTT CGTGTACTGG GGCGAGGCGC GCGCGACCAG CGTCGGCCTG
TGCGCGGCCC CGGTCGATGT CTCGGCCTAT CTGCGCAAAT ACCTGCTGCC CATCGCCCCG
GCCGCGATCT TCACCTCGGC GACCCTGCGC GCGGCCGGCA GCTTCGACTA TCTGCGCCAG
CGCCTCGGCC TCGACAGCGA GATCGCCGAC GAGCTGGCCG TGCCCTCGCC CTTCGACTAC
GCGCGCCAGG CCATCTTGTA TCTGCCCCGC GACTTGCCCG ACCCGCGCGA CGCCGGTTTC
ACGGCCGCGG CCTGCGCGCG CGTGGTCGAG CTGTGCGCCA TCACCGGCGG CCGCGCCTTC
GTGCTCTTCA CCAGCCACCG CGCCCTGCGC GAGGCCGCCC GGCGCCTGCT CGGCACGCTG
CCGCATGAGG TCCTGGTGCA GGGCCAGATG CCGCGCGCCG CGCTGGTCGA GCAGTTCCGC
GCCCGGCCCG GAGCCGTGCT GCTCGGCACC GGCACCTTCT GGGAAGGCGT GGACGTGCCC
GGCGACGCGC TCAGCCTGGT CATCGTCGAC AAGCTGCCCT TCGCCCCGCA CACCGACCCG
CTGGTGCGCG CGCGCGTGCA GCGCATCGAG AGCCGCGGCG GCGCCCCCTT CGAGGGCTAT
CAGGTGCCGC AGGCGGCGCT GGCACTCAAG CAGGGTTTTG GCCGCCTCAT CCGCCGCAGC
GACGACCGCG GCATCGTCGC CGTGCTCGAC CCGCGCATCG TCACCCGACG CTACGGGCGC
GCGTTCCTCG ACACCCTGCC CGCCGACATC ACCCGCACCT CGGTGCTCGA ACAGGTCCGC
CGCTGGTGGC AGCGCGGCCC CGCGCCGGTC TCCTCCTCCG GCGACGGCCA GGCCGGGGAC
GCCGTCGCCG CGCGCGAGAA AAGCGAGTAG
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| Protein sequence | MFSDIASHAG LSVERVLGPS GILRACTPHY EDRPEQRHMA HAVAEALAHQ GALLVEAGTG
TGKTLAYLVP ALLSGKRVVI STGTRALQDQ ITRNDIPLLE EILPRQFTAV TLKGVSNYVC
VRKLWDVSAR LAMAPEARRD YQTVAEWARD SPTGDRAELT AVADDAPIWA ALTNTPDTRI
GPRCPFFEQC FITRARRRAE KADLIIVNHH LFFADLSLRS SYPGARVLPE YEAVVFDEAH
QLEDVMTEHF GVQVSTVRLA QLARDARHSS AGRNGPLFPN AQSSEKASDD DDSPKPSTRP
METSTERIIA HLERCAEGFF ISVRAALRES PAGDGGRVPL DDSLFADSDR QEAWFRLDSA
LDELAAHATL RADELASDSA EAAAYAIGED NPGNADERAE ALAAVAVRAE MLRGDLALLA
ERSERAFVYW GEARATSVGL CAAPVDVSAY LRKYLLPIAP AAIFTSATLR AAGSFDYLRQ
RLGLDSEIAD ELAVPSPFDY ARQAILYLPR DLPDPRDAGF TAAACARVVE LCAITGGRAF
VLFTSHRALR EAARRLLGTL PHEVLVQGQM PRAALVEQFR ARPGAVLLGT GTFWEGVDVP
GDALSLVIVD KLPFAPHTDP LVRARVQRIE SRGGAPFEGY QVPQAALALK QGFGRLIRRS
DDRGIVAVLD PRIVTRRYGR AFLDTLPADI TRTSVLEQVR RWWQRGPAPV SSSGDGQAGD
AVAAREKSE
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