Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_6606 |
Symbol | |
ID | 8549023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 9060728 |
End bp | 9061909 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 646391266 |
Product | HtrA2 peptidase |
Protein accession | YP_003270965 |
Protein GI | 262199756 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.211294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.127864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCAT CGCCGCTGCC GTCGCCGTCC CGCGTTTGCC CTCTGCCCGC CGCGTCCGCG CCGTCCCCGC ACACCGCCCG GCGGACGCGC GCACGCGCCC CGCTGCTGAG CCTGGCCCTG AGCCTGGGCC TGGCGCTGAC CCTGGCGTCG GCCGCGCCCG GCGATGCCCG GGCGCAGCTC CTGCGCGGCG ACGACACCAC CATCTCCGAC GTCACCGAAA AGGCGCTGCC CAGCGTGGTC AATATCTCGA CCACCACCTC GCAGTCCGCG CGCGGGCCCT CGTTCTTCGA TCCCTTCTTC AACGACGAAA ACTCACCCTT TCGCGGCCGC CCCGGCAAAC GCTACGGCCA GAGCCTGGGC TCGGGCGTCA TCATCTCGGC CGACGGCTAC GTCATCACCA ACAGCCACGT GGTCGAAGAC GCCAAAGACA TCCGCGTCTC ACTCTCAGAC GGCCGCGAGC TGAGCGCCAA GATCGTGGGC AGCGACCCCA AGAGCGACCT GGCCGTGCTC AAGCTCGAGG GCGCGAGCGG GCTGCAGCCC ATCCGCATCG GCCGCTCGAG CAACATCCGC CTGGGCGAGA TCGTGCTCGC CATCGGCAAC CCCTTCGGCG TCGGCCAGAC CGTGACCATG GGCATCGTCT CGGCCAAGGG CCGCTCGGGC ATGGGCATCG TCGACTACGA GGACTTCATC CAGACCGACG CCGCCATCAA CCCGGGCAAC TCGGGCGGCG CGCTGATCAA CCTGCGCGGC GAGCTGATCG GTATCAACAC CGCGATCCTG TCGCGCACCG GCGGCTACCA GGGCATCGGC TTCGCCATCC CCACGGACAT GGTCGCGCCC ATCAAAGACA GCCTCATCCG CGACGGCGCC GTGGCCCGCG GCTTCCTCGG CGTCAACATC CAGACCCTGA CCAGCGAGCA GGCGCGCGCC GCCGGCGTCC CCGACCTGCG CGGCGTCTTG ATCACGCGCG TGGTCGAACG CAGTCCGGCC GCCCGCGCCG GCCTGCGCCG CGGCGACATC ATCACCCGCG TCGGCGACCG CATCACGCTC ACGGCCGCGC ACGTGGTCAA CTCCGTGGGC ATGAGCCGTC CCGACAAACG CCTGGCCCTG ACCATCATGC GCGACGGCAA GACGCGGCGC GTCGCAGTAA AACTTGGCGA TTTATCGCAG GTGCCGGAAT AA
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Protein sequence | MNSSPLPSPS RVCPLPAASA PSPHTARRTR ARAPLLSLAL SLGLALTLAS AAPGDARAQL LRGDDTTISD VTEKALPSVV NISTTTSQSA RGPSFFDPFF NDENSPFRGR PGKRYGQSLG SGVIISADGY VITNSHVVED AKDIRVSLSD GRELSAKIVG SDPKSDLAVL KLEGASGLQP IRIGRSSNIR LGEIVLAIGN PFGVGQTVTM GIVSAKGRSG MGIVDYEDFI QTDAAINPGN SGGALINLRG ELIGINTAIL SRTGGYQGIG FAIPTDMVAP IKDSLIRDGA VARGFLGVNI QTLTSEQARA AGVPDLRGVL ITRVVERSPA ARAGLRRGDI ITRVGDRITL TAAHVVNSVG MSRPDKRLAL TIMRDGKTRR VAVKLGDLSQ VPE
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