Gene Hoch_6582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6582 
Symbol 
ID8548999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9031035 
End bp9032006 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content69% 
IMG OID646391242 
ProductElectron transfer flavoprotein alpha subunit 
Protein accessionYP_003270941 
Protein GI262199732 
COG category[C] Energy production and conversion 
COG ID[COG2025] Electron transfer flavoprotein, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.31161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAACG TCCTCGCATT CTGTGAAGTC GGCGACAGCA GCGTTCGCTC GAACGCCCTC 
GCCAATCTTG CCTTTGCCCG CGCCGCCGCC GAGAAGCACG GCGGCGAGGT CATCGCCTTG
CTCATCGGCA AGAGCGCCTC GGGCGCCGGC GCCGACGCCG CGCGCTACGC CAAGAAGGTC
ATCACCGTCG ACAGCGACCA GCTCGAGCAC TACCTGGCCG AGACCTACGC GCCGATCATC
GCCCGCATCG CCAAGGAGCA GGGCGCCAGC GTGGTCTGCG CCACCGCCTC GACCACGGGC
AAAGACGTGA TGCCGCGCGT GGCCTTCGAT CTCGAGGCCA GCATGGCCTC GGACATCTCG
GGCATCGACG ACAAGAACCA GTTCCGCCGC CCGATCCTGG CCGGCAACGC CTACGCCACC
GTGGCCGTCG AGACCGAGGT CATCTGCGTG ACCGTACGCC AGAGCGAATT CGACCCGGCC
GCGCCGCTCG ACGCCGCGGG TGAGGTCAGC AGCGCCGACG CCGGCGAGAT CGACGCCCTG
GGCGCCGAGG TCGTGCGCGT CGAGAGCAGC AAGAGCGACC GCCCCGACCT CAACGACGCC
GACGTGGTCG TGTCCGGCGG CCGCGGCATG AAGAGCGGCG ACAACTTCAA GGTGCTCGAG
GAGCTGGCCG ACGTGCTCAA CGCGGCCATG GGCGCCTCGC GCGCGGCCAC CGACGCCGGC
ATGGTTCCGG CCGACTGGCA GGTCGGACAG ACCGGCAAGA TCGTCGCCCC CAACCTGTAC
ATCGCCGTGG CCATCTCGGG CGCCATCCAG CACCTCGCTG GCATGAAGGG CTCGAAGACC
ATCGTCGCCA TCAACAAGGA CGCCGAGGCG CCGATTTTCC AGGTCGCCGA CTACGGTCTG
GTCGAGAGCT GGGAGAAGGC CATCCCCGAG CTCGTCGAGG AGATCAAGAA GGTCAAGGCG
GCCAACGCCT GA
 
Protein sequence
MGNVLAFCEV GDSSVRSNAL ANLAFARAAA EKHGGEVIAL LIGKSASGAG ADAARYAKKV 
ITVDSDQLEH YLAETYAPII ARIAKEQGAS VVCATASTTG KDVMPRVAFD LEASMASDIS
GIDDKNQFRR PILAGNAYAT VAVETEVICV TVRQSEFDPA APLDAAGEVS SADAGEIDAL
GAEVVRVESS KSDRPDLNDA DVVVSGGRGM KSGDNFKVLE ELADVLNAAM GASRAATDAG
MVPADWQVGQ TGKIVAPNLY IAVAISGAIQ HLAGMKGSKT IVAINKDAEA PIFQVADYGL
VESWEKAIPE LVEEIKKVKA ANA