Gene Hoch_6556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6556 
Symbol 
ID8548973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9000559 
End bp9001035 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content68% 
IMG OID646391218 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003270917 
Protein GI262199708 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.604564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.177628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCC TCGATCGCAT CGACCTGGTC ATCTTGGGGG CACTCCAGGA CAACGCCCGC 
CTGTCCAATA AAGAGCTGGC CGGCATCGTC GGCATCGCCC AGTCCACCTG TCTCGAGCGC
GTGCGCCGCC TGCAGGAACA CGGCGTGCTG CTCGGCGCCC ACGCCGCGGT CGCGCCCCAC
GCCATCGGCG TCGGCCTGCA GGCTATGATC TCGGTGCGCC TGTCGCGCCA CTCCCAGGAA
CACGTCGCCA GCTTCCGCAG CCGCGTGCTG GCGCTGCCCG AGGTCATGGG CTTCTTCTAC
ATGGCCGGGG CCACCGACTT CCTGGTCCAC GTGGCCGTGC GCGACTCCGC CCACCTGCGC
GACCTGGCCC TCGAGACCTT CTCCAGCCAC GACGACGTCG CACACATCGA GACCTCGCTG
ATCTTCGAGC ACGTCGCCAG CCCGGTATGG CCCATCCTGG TCGAATCCGA AGACTAG
 
Protein sequence
MKALDRIDLV ILGALQDNAR LSNKELAGIV GIAQSTCLER VRRLQEHGVL LGAHAAVAPH 
AIGVGLQAMI SVRLSRHSQE HVASFRSRVL ALPEVMGFFY MAGATDFLVH VAVRDSAHLR
DLALETFSSH DDVAHIETSL IFEHVASPVW PILVESED