| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6540 |
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| Symbol | |
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| ID | 8548957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 8974985 |
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| End bp | 8976364 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646391203 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_003270902 |
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| Protein GI | 262199693 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00743621 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATCA GCATTTTCGA CATGTTCACC GTCGGCATCG GCCCCTCGAG CTCGCACACG
GTCGGCCCCA TGCGCGCGGC TCGGCGTTTC GTCGCGCACC TGGAGGCGCG CGGAACCCTG
GCGGCGACGC GCTCGCTGCG GGTCGAGTTA TTCGGCTCGC TGGGTCACAC CGGCAAGGGC
CACGGCACCG ATCGCGCGGT GCTCATGGGC CTGGAGGGCG AGGATCCCGA GACCGTGGAT
CCCGGCACCA TCGGCCAGCG CGTGGCCGCG ATCGAGGAGC GCCAGCGGCT GACGCTCAGC
GGCGGCCACG AGATCGACAT GGTGCCGGCG CGGCATCTGG TGTGGCATCG CAAGAAGATC
CTGCCCGTGC ACTCCAACGG GCTGCGCTTC GCGGCCCTGG GCGACGACGG CCTGGAGCTG
AGCAGCCGTA TCTACTACTC GGTGGGCGGC GGCTTCGTGG TCCCGGGCGA CACCGACGTC
GAGGCCCCGT TCATCGCGCC GCGTCCGAGC GCGCCGTATC CGTTCACCAG CGGCGACGAG
TTGCTGGCGC AGTGCGCCGA GCACGGCATC TGCATCAGCA CCTTGATGCT CGAGAACGAA
AAGGCCTGGC GCAGCGAGGA CGAGGTGCGC GGCGAGCTGT TGCGCATCTG GGGCGTGATG
CAGGCGTGTA TCGAGCGCGG CTGCCGCAGC GAGGGCATCC TGCCCGGCGG GCTCAAGGTC
AAGCGCCGGG CCGCCGCCAT CCATCGCAAG CTGCGCGCCG AGGCCAGCAG CGTCGGCAAC
AGCGCGCTGG TGCTCGACTG GGTCAACCTG TTCGCGATCG CGGTCAACGA GGAGAACGCG
GCCGGCGGGC GCGTGGTCAC GGCGCCGACC AATGGCGCGG CCGGCGTCAT CCCGGCGGTG
CTGTCGTATT TCGTGCGCTT CTGCGGCAGC GACGCAACCG AGGAGGGCGT GGTGCGCTTT
CTGCTCACGG CCGGCGCCAT GGCCATTCTG TACAAGATCA ACGCGTCGAT CTCGGGCGCC
GAGGTCGGCT GTCAGGGCGA GGTCGGCGTG GCCTGCTCGA TGGCGGCCGC GGGCCTGGCC
GAGGTCCTCG GCGGCAGCCC CGAGCAGGTC GAGAACGCGG CCGAGATCGG CATGGAGCAC
AACCTCGGCC TCACCTGCGA TCCCGTCGGC GGGCTGGTGC AGGTGCCGTG TATCGAGCGC
AACGCCATGG GCGCGGTCAA GGCCATCAAC GCGGCGCGTC TGGCGCTGCG CGGCGACGGC
AAGCACACGG TGTCGCTCGA CAAGGTCATC CGCACCATGC GCCAGACCGG CGCCGACATG
AAGGCCAAGT ACAAAGAGAC CGCGCGCGGC GGCCTCGCGG TCAACATCGT CGAGTGCTAG
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| Protein sequence | MSISIFDMFT VGIGPSSSHT VGPMRAARRF VAHLEARGTL AATRSLRVEL FGSLGHTGKG
HGTDRAVLMG LEGEDPETVD PGTIGQRVAA IEERQRLTLS GGHEIDMVPA RHLVWHRKKI
LPVHSNGLRF AALGDDGLEL SSRIYYSVGG GFVVPGDTDV EAPFIAPRPS APYPFTSGDE
LLAQCAEHGI CISTLMLENE KAWRSEDEVR GELLRIWGVM QACIERGCRS EGILPGGLKV
KRRAAAIHRK LRAEASSVGN SALVLDWVNL FAIAVNEENA AGGRVVTAPT NGAAGVIPAV
LSYFVRFCGS DATEEGVVRF LLTAGAMAIL YKINASISGA EVGCQGEVGV ACSMAAAGLA
EVLGGSPEQV ENAAEIGMEH NLGLTCDPVG GLVQVPCIER NAMGAVKAIN AARLALRGDG
KHTVSLDKVI RTMRQTGADM KAKYKETARG GLAVNIVEC
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