Gene Hoch_6504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6504 
Symbol 
ID8548921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8933616 
End bp8934803 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content63% 
IMG OID646391167 
ProductSaccharopine dehydrogenase 
Protein accessionYP_003270866 
Protein GI262199657 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1748] Saccharopine dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.752719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAG TCCTCATCAT CGGTGCGGGC GGCGTCGGCG GCGTGGTGGC GCACAAGTGC 
GCTCAGGTCC CCGACGTCTT CTCCGAAATC CTTCTCGCCA GCCGCACCGT GTCGCGTTGC
GAAGCCATCC AGGCGCAGAT CCGCGAGATG TATGGTCGCG AGATCCGCGT GGCCGCGCTC
GACGCCGATC AGGTGGAACA GACCGTCGCG CTGCTGCGCG AGTTCCGGCC GCACCTGGTC
ATCAACGTAG CACTGCCATA TCAAGATTTG CACATCATGG ACGCCTGCCT CGAGGCCGGC
GTGGACTACC TCGACACCGC CAACTACGAG CCGCCCGATG AGGCCAAGTT CGAATACAAA
TGGCAGTGGG CGTATCACGA TCGCTACGCC AAGGCCGAGC GCATGGCGCT GCTCGGTTCG
GGCTTCGATC CCGGCGTGAC CAACGTCTTT TGTGCCTACG CGCAGAAGAA GCTGTTCGAC
GAGATCCACT ACATCGACAT CCTCGACTGC AACGCCGGCG ACCACGGTCA CCCCTTCGCC
ACCAACTTCA ATCCCGAGAT CAACATCCGC GAGATCACGC AGCGCGGACG CTTCTGGGAG
GATGGTTCTT GGAAGGAAAC CGACCCGCTG TCCGTCCACC AGACCTTCGA CTTCCCCGAG
GTCGGCCCGC GCAAGGCCTT CCTGCTGTAC CACGAGGAGA TGGAGTCGCT GGTCGAGAAC
ATCGACGGCC TGCGCCGCAT CCGCTTCTGG ATGACCTTTG GCGACGAGTA CCTCACCCAT
CTGCGCGTGC TGCAGAACGT GGGCATGACC GGCATCGAGC CGGTGGCGTT CCAGGGTCAG
GAGATCGTGC CCATCCAGTT CCTCAAGGCG CTGCTGCCGG ATCCCTCCTC GCTGGCCGAG
AACTACACCG GCAAGACCTC CATCGGCTGC CTCATCGAAG GCGTCAAGGA CGGCAAGCCC
AAGAAGGTGT TCATCTACAA CGTCTGCGAT CACGCCAAGT GCTACCAGGA AGTGCGCGCC
CAGGCGGTGT CGTACACCAC CGGCGTACCG GCCATGATCG GCGCAAAGAT GATGCTCACG
GGCGCGTGGC GCGGCAACGG CGTGTTCAAC ATGGAGCAGC TCGACCCCGA GCCCTTCATG
GAGGCGCTAA GCGAGCACGG CCTGCCCTGG CACATCAAAG ACATGTAG
 
Protein sequence
MSRVLIIGAG GVGGVVAHKC AQVPDVFSEI LLASRTVSRC EAIQAQIREM YGREIRVAAL 
DADQVEQTVA LLREFRPHLV INVALPYQDL HIMDACLEAG VDYLDTANYE PPDEAKFEYK
WQWAYHDRYA KAERMALLGS GFDPGVTNVF CAYAQKKLFD EIHYIDILDC NAGDHGHPFA
TNFNPEINIR EITQRGRFWE DGSWKETDPL SVHQTFDFPE VGPRKAFLLY HEEMESLVEN
IDGLRRIRFW MTFGDEYLTH LRVLQNVGMT GIEPVAFQGQ EIVPIQFLKA LLPDPSSLAE
NYTGKTSIGC LIEGVKDGKP KKVFIYNVCD HAKCYQEVRA QAVSYTTGVP AMIGAKMMLT
GAWRGNGVFN MEQLDPEPFM EALSEHGLPW HIKDM