Gene Hoch_6450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6450 
Symbol 
ID8548865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8854828 
End bp8855589 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content64% 
IMG OID646391111 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_003270812 
Protein GI262199603 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACACC ACATCAAAGA GTTTCCGGCC GGGACCCTGT TCTTCCGTCA GGGAGAAGAG 
GGAAACGTGA TGTATGTGAT CCAGAGCGGC GTCGTCGAGA TCCGGAGAAA GTTTTATAAT
CGCGAGTTCC TGCTGGCCGT GCTGCAGCCC GGCGGGTTCT TCGGCGAGAT GGCGCTGGTG
ACCCGGCAGC CGCGTTCAGC GAGCGCCGTC GCCCGCGATG ATACGCGCGT GCTGGTGCTC
AAAGAGAGCA CGCTCAACGG CATGCTCAAG GAGCGCCCGG ACATCTCGGC GCGGATCATC
CAGACCATGG CGCGGCGCAT GTCGATGACC AATCGGCAGA TGGAGCTGTT CCTCTTCAAC
CACGCCGATA AGCGCCTGGT GCACTGCCTG TGCTTCCTCG CCGAGGAGTA TCTCCCCCCC
GGTCAGGTGG CGAGCGGAGC CGTGTACGTG CCGGTGCCGC TGAGCGAGCT CGCCGACCGC
TGCGCTATGA CCCGGGCTCA GGCCGTGGAC GTGATCGAAC GTCTGGCCGA AGCTGGGTTG
ATCATTCCCG CCTCGGCGGC CGAAATCGAC GGCCCCGGCT ACGTGGTGGC GGACTCCTCT
GCGCTCATTG ATTTTCTCAA GGCGCAGCAG TCGGCGCTCA AGCGCAACCA GCAGCGCCGC
CGCGCCGCGC TGATGGAGCA GTTCAAGAGC AATCAGGCGA ACAACGCCGC CAAACCGGCT
TCGGGGCAAG AAGCCGAACT CGATAGCTGG CTCTCCAAGT AG
 
Protein sequence
MEHHIKEFPA GTLFFRQGEE GNVMYVIQSG VVEIRRKFYN REFLLAVLQP GGFFGEMALV 
TRQPRSASAV ARDDTRVLVL KESTLNGMLK ERPDISARII QTMARRMSMT NRQMELFLFN
HADKRLVHCL CFLAEEYLPP GQVASGAVYV PVPLSELADR CAMTRAQAVD VIERLAEAGL
IIPASAAEID GPGYVVADSS ALIDFLKAQQ SALKRNQQRR RAALMEQFKS NQANNAAKPA
SGQEAELDSW LSK