Gene Hoch_6443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6443 
Symbol 
ID8548858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8843014 
End bp8844048 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content75% 
IMG OID646391104 
ProductNHL repeat containing protein 
Protein accessionYP_003270805 
Protein GI262199596 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGCGCG GGCGCGATGA CGGCATACTC GGGGCCGTGT CCCGCATCAC CATGGATATC 
GACATCGAAT CGTCCAAGCG GGCATTCCCC GTGCGCGCAC CCGGCCACGT GGCCGTCGAC
GAACACGGCA CCCTGTGGAC CGCCGACACC GGGAACCACC GTCTGGTCAT GGCCGACCGC
GGCGGCGCGG TGCGTCTGGT GGTCGGCAGC GGCGACCCGG GCTGGCGCGA CGGCGACGGC
GCCGACGCCG CGCTGCACGC GCCCCGGGGC ATCGCCGTGT GCGCGTCGGG GCGGCGTCTG
TACGTCGCCG ACAGCGGCAC CTGCACCATC CGCCGCGTGG ACCTCGACGC CGTGGGCGAC
GCCACCGTGA CCACCGTCGC CGGCACCGGC GAGCGCGGCG AGGCCCTCGC GCCCGGCCGC
CGTCCGGCGC TGCGCACCGC CTTGCCCGGG CCCGTGGCCG TGGCCGTGGA CGAGGACCGC
GAGCTGCTGT TCGCGACCAT GGACGCCGGG CAGGTATGGG TCGTCGAGCT CAGCGGCGAG
CGCGCGGCGG CTCCCTGCGC GGGCTCGCGG AGCGGCGGCC AGGGCGACGG CGCCTGCTTC
GAGGCCGGGT TCGCAGCGCC GGCCGGCCTG GTGCTCTCGT CCGATCGCAA ACGCCTGTAC
ATCGCCGACG CCGGCGCCTC GGCCGTGCGC GTGCTGTACC TCGACGCCAA CGTGGTCGAG
ACCCTGGAAG TGACGACGCT CGACGAGTCC GACAGCCCAC TGCGCGGCTG CGTCGGCCTG
TGCTTGGGCC CCGGCGGGCT CGCGCTCGCC GACACCGGCA ACCACGCGCT GCGCGGCTTC
AACCTGCGCC ACGGGCGGCT GATGACCATC TGGCAGGGGG ACGAGCTGCC CCTGGCATCG
CCCCAGGCCG TGTGCCTCGA CCGTCGCGCG CGCCGCTACG TGGTCGCCGA CACCGGCAAC
GACCGGCTGG TGTTCGTGGC CACCGACGCC TCGCGCGCCG GCGTGCTGCC GCTGAGCATC
TCGCGCCCAT TGTGA
 
Protein sequence
MERGRDDGIL GAVSRITMDI DIESSKRAFP VRAPGHVAVD EHGTLWTADT GNHRLVMADR 
GGAVRLVVGS GDPGWRDGDG ADAALHAPRG IAVCASGRRL YVADSGTCTI RRVDLDAVGD
ATVTTVAGTG ERGEALAPGR RPALRTALPG PVAVAVDEDR ELLFATMDAG QVWVVELSGE
RAAAPCAGSR SGGQGDGACF EAGFAAPAGL VLSSDRKRLY IADAGASAVR VLYLDANVVE
TLEVTTLDES DSPLRGCVGL CLGPGGLALA DTGNHALRGF NLRHGRLMTI WQGDELPLAS
PQAVCLDRRA RRYVVADTGN DRLVFVATDA SRAGVLPLSI SRPL