| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5683 |
|---|
| Symbol | |
|---|
| ID | 8548097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 7797880 |
|---|
| End bp | 7798953 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646390351 |
|---|
| Product | ferrochelatase |
|---|
| Protein accession | YP_003270053 |
|---|
| Protein GI | 262198844 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0276] Protoheme ferro-lyase (ferrochelatase) |
|---|
| TIGRFAM ID | [TIGR00109] ferrochelatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0596744 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.050852 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCC TCCTGCTGAT CAACCTGGGC ACCCCGGACG CGCCCGAGAC CGGCGCCGTC
CGGCGGTATT TACGCGAGTT CTTGTCCGAC CCGCGGGTCA TCGACATCAA CCCGGTCGGC
CGCTTCCTGC TGCTCAATCT GTTCATCTTG CCGTTTCGGC CGGCCAAGAG CGCGGAAGCC
TACCGGCAGA TCTGGAACGA TCGCGGCTCG CCGCTGCTGT ATCACAGCCA AGATCTCGCC
ACCCTGGTGC GCGAACGCCT GGGCGAGGGC TGGCAGGTCG AGTTGGCCAT GCGCTACGGC
CAGCCCGCGA TCGCGGACGC ACTCGAGCGC TTCCGCCGCG CCGGCGTCGA CCGCATCGTG
GTCTTGCCGC TGTTTCCGCA GTACGCCTCG TCGAGCACGG GCAGCGCGCT CGAGGAGGTG
TTCGCGATCG CCGGCAAGGA GTGGAACGTG CCCCGGCTCA GCGTCATCGA GGATTTCTTC
GACGACGCCA ACATGATCGC GGCCTTTGCC GCCCAGGGGC GCCCGGTGAT CGAGGGTCTG
CGCGCCGATC ACGTGCTGTT CTCGTTCCAC GGCCTGCCCG AGCGGCAGGT GCAGAAGAGC
GACGAGTCCG GCGGCAAACA CTGTTTGCAG AGCCCCGGCT GCTGCGACGC CATCGTGCAC
GCCAACCGCA ACTGCTACCG CGCCCAGTGC TACGCCACCG CGCGCCTGCT CGCGGCCGAG
CTGGAGCTGG CCGACGACGG CTACACCGTG TGCTTCCAGT CGCGGCTGGG GCGCACGCCG
TGGATTCAGC CGTACACCGA CCACGTGCTC GACCAGCTCG CGGCCGCCGG CAAGAAGCGC
CTGGCCGTGT TCTGTCCCGC CTTTGTCGCC GACTGTCTCG AGACCATCGA GGAGATCGGC
ATGCGCGCCA AGGAGCAGTT CACCGGCGCG GGCGGCGAGG ACCTGGCGCT GGTGCCCTCG
CTCAACGCCA CGCCGCTGTG GGCCGACGCG GTGGTGGCCA TGGTCGAGCG CCACGCGCGC
ACGCTGGGCC TGGGCACGAG CCCGGTGCTG CCGGCGCGCG CCGCCAACGA GTGA
|
|---|
| Protein sequence | MSGLLLINLG TPDAPETGAV RRYLREFLSD PRVIDINPVG RFLLLNLFIL PFRPAKSAEA
YRQIWNDRGS PLLYHSQDLA TLVRERLGEG WQVELAMRYG QPAIADALER FRRAGVDRIV
VLPLFPQYAS SSTGSALEEV FAIAGKEWNV PRLSVIEDFF DDANMIAAFA AQGRPVIEGL
RADHVLFSFH GLPERQVQKS DESGGKHCLQ SPGCCDAIVH ANRNCYRAQC YATARLLAAE
LELADDGYTV CFQSRLGRTP WIQPYTDHVL DQLAAAGKKR LAVFCPAFVA DCLETIEEIG
MRAKEQFTGA GGEDLALVPS LNATPLWADA VVAMVERHAR TLGLGTSPVL PARAANE
|
|---|
| |