Gene Hoch_5660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5660 
Symbol 
ID8548074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7767658 
End bp7768134 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content74% 
IMG OID646390328 
Productprotein of unknown function DUF1643 
Protein accessionYP_003270030 
Protein GI262198821 
COG category[S] Function unknown 
COG ID[COG4333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.163406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCGCG GTGCCACCAT CGATCCCAGC GGCCGCTACC GCTACCGGCT GTGGCGCACG 
TGGGACGCGG CGGGCACGCG CGTGCTGTTC GTGATGCTCA ACCCCAGCAC GGCCGATCAC
CGCCAGGACG ATCCCACGAT CCGGCGCTGC ATCGGCTTTG CTCGCGCCTG GGGACACGGG
CGGCTGGCGG TGGTCAATCT GTTCGCGCTG CGCACGCCCT CGGTGGCCGA GCTGCGCCGC
GCCCGCGCTC CGGTCGGACC AGACAATCAG CGCCACCTGC GCGCCAGCCT GCGCGCGGCC
GATCGCGTGA TCGCGGCCTG GGGCGTGCAC GGGGCCGCCC GCGCCGGCGA GCTGCTGCCG
GCGCTGGCCG AGGCCGCGCG GGCGCCGCTC GAGTGTCTCG GCACCACGCG CGACGGCCAC
CCGCGCCATC CTCTGTATGT GCGCGCCGAT GTCCGGCCGA TTCGCTTTGT CTGGTAA
 
Protein sequence
MRRGATIDPS GRYRYRLWRT WDAAGTRVLF VMLNPSTADH RQDDPTIRRC IGFARAWGHG 
RLAVVNLFAL RTPSVAELRR ARAPVGPDNQ RHLRASLRAA DRVIAAWGVH GAARAGELLP
ALAEAARAPL ECLGTTRDGH PRHPLYVRAD VRPIRFVW