| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5639 |
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| Symbol | |
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| ID | 8548053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7742398 |
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| End bp | 7744059 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 646390307 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003270009 |
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| Protein GI | 262198800 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAAG CGATACGTCT ACAGCGCTAT CTATCGCAGT GCGGGGTCGC GGCCCGGCGC
AAGGCGGAGG AGCTCATCAC CAGCGGCGTG GTCAGCGTCA ACGGGCAGCG GGTCACCGAG
CTAGGGACCA AAGTCGTGCC CGGTCGCGAC CGCGTGAGCG TCCGCGGCGA AGCGGTCTAT
CCCGAGGAGC CCTTCTACGT GCTCCTCAAC AAGCCCAAGG GCTGCCTGAC CGCGGTCACC
GACCCCGAGA ACCGGCCCAC GGTCATGGAG TATCTGCACG GTCTGCCTGC GCGGGTCGTG
CCGGTGGGCC GCCTCGACTT CTACAGCGAG GGCGTGCTGC TGCTGACCAA CGACGGCGAC
CTGTCGGCGC GGCTGCAATC GCCCCGCCAC CACGTCGAGA AGACCTACCA CGTCAAAGTG
CGCGACCAGG TCACCGAGCG CCACCTCGAG GTGTTGCGCC AGGGCGTGCG CCTCGAGGAC
GGCACGGTGA CGCGGCCGGC GCAGATCGAC ATGCTCGGGG GCACCAAGAG CCGCCACGAT
TGGCTGGTCA TCACCCTGAC CGAGGGCAAA TCGCGGCAGA TTCACCGCAT GCTCGGCGTG
CTCGGCTACA CGGTCATGAA GCTGCAGCGC GTGGCCTTTG GCGGGCTGAC CTTCCACGGT
CTGCGCGTGG GCGACGCGCG CGAGTTGACG CAAGCCGAGG TCAACGATCT GCGCGAGCTG
GTCGGACTTC CCAAGGACAC GGTGGCGCGC GGCAAGTGGA CTTCGCGTCG TGAAGAGACC
GAACGCGCCC GGCGCAGCCG CGCCCGCGCG CGCGTTGGCA TGAGCGGCGG CCGGGACGGG
GGCCGTGATT TTCGTACGGG TGGACGAGGT CGCGACGGCG GCTACGGTGG GCGCGACGGC
GGTCGCGATC GCGGCTACGG CGGACGCGAC GGAGGCCGTG ATCGCGGCTT CGGCGGCCGC
GACGGCGACT ATGGCGGACG TGATGGCGGA CGCGACGGCG GCTACGGCGG ACGCGACGGA
GGTCGTGAGC GCGGCTTCGG TGGTCGCGAC GGCGGCCATG GCGGTCGCGA TGGCGGCCGT
GACGGCGGCT ATGGCGGACG CGACGGAGGT CGTGAGCGCG GCTTCGGTGG TCGCGACGGC
GGTCGCGATC GTGGCCACGG CGGACGCGAT GGTGGCCGTG ACGGCGGCTA TGGCGGTCGG
GGTCGCGACG GCGCCTCGGG CGGCCCGCGC GGTCCCGGAG GTGGACGCGG GGACGGCCCG
CGCGGTCGCA GCGGCGGCCC CGGAGGCGGA CGCGGCGACG GCCCGCGCGG TCGCAGCGGC
GGCCCCGGAG GCGGACGCGG CGACGGCCCG CGCGGTCGCA GCGGCGGCCC CGGAGGTGGA
CGCGGCGACG GCCCGCGCGG TCGCAGCGGC GGCCCCGGAG GCGGACGCGG CGACGGCCCG
CGCGGTCGCA GCGGCGGCCC CGGAGGTGGA CGCGGCGACG GCCCGCGCGG TCGCAGCGGC
GGCCCCGGAG GCGGACGCGG CGACGGCCCG CGCGGTCGCA GCGGCGGCCC CGGAGGCGGT
GGTCCCGGCG GTAAGCGCGG CGGACCGTCT CGCGGTGGTC CGCGTCCGTC CGCTCGTCCG
AAAAAAGGCG GCGGTCCCTC TCGCGGCGGC TCGTCGCGCT GA
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| Protein sequence | MDEAIRLQRY LSQCGVAARR KAEELITSGV VSVNGQRVTE LGTKVVPGRD RVSVRGEAVY
PEEPFYVLLN KPKGCLTAVT DPENRPTVME YLHGLPARVV PVGRLDFYSE GVLLLTNDGD
LSARLQSPRH HVEKTYHVKV RDQVTERHLE VLRQGVRLED GTVTRPAQID MLGGTKSRHD
WLVITLTEGK SRQIHRMLGV LGYTVMKLQR VAFGGLTFHG LRVGDARELT QAEVNDLREL
VGLPKDTVAR GKWTSRREET ERARRSRARA RVGMSGGRDG GRDFRTGGRG RDGGYGGRDG
GRDRGYGGRD GGRDRGFGGR DGDYGGRDGG RDGGYGGRDG GRERGFGGRD GGHGGRDGGR
DGGYGGRDGG RERGFGGRDG GRDRGHGGRD GGRDGGYGGR GRDGASGGPR GPGGGRGDGP
RGRSGGPGGG RGDGPRGRSG GPGGGRGDGP RGRSGGPGGG RGDGPRGRSG GPGGGRGDGP
RGRSGGPGGG RGDGPRGRSG GPGGGRGDGP RGRSGGPGGG GPGGKRGGPS RGGPRPSARP
KKGGGPSRGG SSR
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