Gene Hoch_5621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5621 
Symbol 
ID8548035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7716869 
End bp7717846 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content72% 
IMG OID646390292 
Productcobalamin synthesis protein P47K 
Protein accessionYP_003269994 
Protein GI262198785 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.16465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCA ACGACCAGGT ACCTTTCTCG ATCCTCACCG GCTTTCTCGG CGCCGGCAAG 
ACCACGGTGC TCAACCGGAT GCTGTCGGCG CCGCAGGGCA AACGCATCGC CGTGCTCGTC
AACGAGCTGG GGCGCGTGGC CATCGACAGC CGCCTGATCC TGTCGCGCGG CGGCGACGTG
CTCGAGCTGG CCGGCGGCTG CGTGTGCTGC AAGATCGACG TCAAGAACGA CCTGTGGGAC
GGCATCGCCG ACGTGGTGCG GCGCTCGGCC CCCGACCACG TTGTCCTCGA GACCACGGGC
ATCGCCGAGC CGGCGGCCAT CATCGAGGGC TTTGAGCGGC TGCCCGCCAG CGAGCGCGAG
CGCATCGAGG TCGCCGGCGT GATCTGTCTG GTCGATGCCG AGGCCGGTGC CGAGCGCCTC
GACCGGCGCG ACGAGATCCG CGCGCAGATC GAGATGGCCG ATCGCCTGCT GCTCACCAAG
CTCGATATCG CCTCGGCCGA CGCGCTCGAG GCGCTGCACG CGCGGCTGCG CGAGATGAAC
CCCGAGGCCG AGCGGGCGAG CTTCCCGGCC ACCGAGGAGG GCGACAACGC GCTGACGCCG
TGGCTGCTGG CGCGCCGTCC GGAGGCCGGC AGCAAGCGCG CGTCGCACAC GCATCGCCAC
CGCGGCGCCC AGCTCACGGC GGTCAGCTTC GTCGAGGACG CGCCGCTGCT GGCCGGCCCG
GTGATGGAGT TGATCGAGCA GCTCGGCGAT CGCCTGCTGC GGGCCAAGGG CTTTTTGCAC
CTCGCCGGTG AGGCGCGGCG CGGATTTCTC GAGGTCGCCG GCGTGCGGAC TTCGCTGCGC
TACGACGCGC CCTGGGGCGA CGAGCGGCCG CACACTGAGC TGGTGCTCAT CGGCGAAGAT
CTCGACGAGA ACGTGCTGCG TCGGCGGCTG TGGGCCTGCC GGGCGCAGGC CGCGGACAGC
GGCGCTCAGG GCGCCTGA
 
Protein sequence
MTANDQVPFS ILTGFLGAGK TTVLNRMLSA PQGKRIAVLV NELGRVAIDS RLILSRGGDV 
LELAGGCVCC KIDVKNDLWD GIADVVRRSA PDHVVLETTG IAEPAAIIEG FERLPASERE
RIEVAGVICL VDAEAGAERL DRRDEIRAQI EMADRLLLTK LDIASADALE ALHARLREMN
PEAERASFPA TEEGDNALTP WLLARRPEAG SKRASHTHRH RGAQLTAVSF VEDAPLLAGP
VMELIEQLGD RLLRAKGFLH LAGEARRGFL EVAGVRTSLR YDAPWGDERP HTELVLIGED
LDENVLRRRL WACRAQAADS GAQGA