Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5559 |
Symbol | |
ID | 8547973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 7627642 |
End bp | 7629900 |
Gene Length | 2259 bp |
Protein Length | 752 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 646390232 |
Product | signal transduction histidine kinase, nitrogen specific, NtrB |
Protein accession | YP_003269934 |
Protein GI | 262198725 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGTGC CCGGCAACAT TCAGGCGATC TCGGCGCTGC TGTCGTCGAT CCTCATCGTG GTCATCGGCG TCTCGGTGCT GCTGCGCGAC CGCACGCAGC GCACGTACAC CTCGTTTGCC GCGTTCACGA TCGTGCTGTC GTCGTGGCAC CTGTGCTCGT TCATCGCCAC GGTGACCGAC AGCTCGACGG TGCGCTGGCT GGCGCTGTGG CCGGCGGCCA CCATCCCGCC GACCGCGGTG GCGTTCTTTC GCGAGTTCCT GTCGCAGCCG TCGATCGGCG GCAAGCGCCG GCCGCCGCGC GTGACCCTGG CATGGACCAT CCTCGCCTGC CTGGCCCTGA TCTACGCCGG CTTCATCCCC ATCCACGAGA CCCTGTTCTT TCAGATCCCG TTCGGCGTCT ACGTGTTCGG CGGCCTGTAT CGCTGCGTCT ACGATACGTA TAAGCAATAC CGGGCCACGG TGAAGCGGGT CGAGCGGGTG CGCGTGCGCT ACGTGCTCAT CGGCGGCTTC CTGGCCACGA CCTTCGCGCT CATCGATGTA TTGCCGCGCT TCGGCGTGGC CTGGCCGGCG CTCGGCAACG TCTTCACGAT TCTGTATCTG TACTTCCTAT CGCAGTCGCT GTTTCGCTAT CAGCTCATCG ATATCAACGA GCTGATCGGC AAGATGGCCG TGCTCGGCAC CTTGGTGGCG CTGCTGTGGG CGGTCTACGG CCTGCTGCTG GCGTGGATCG GCCGCGGCCA AGAGGGCCTG TTCCTGCTCA ACGCGCTGGT GGCCTCGTTC GTCATCCTGC TGCTCTACGA GCCGGTGCGC AGCCGCCTCG AGAACGGCAT CCACCGCTGG CTGCTGCGCC AGCGCACCGA GCTGCGCGGC CGCATCGAGC GCCTGGGCCG CGAGCTTCTG CGCGTGACCC ACGTCGACGA GATGGCCTCG CTGATCCTCA CCGCGCTCGA GGAGTCGCGC CGGGTCACGC ACGCGGCCGT GTATCTGCTC GACTCGGCCG GCGCCGGCTA CGATCGCAAG GGTTACTACG GCACCGCGCC GATCGAGCGC ATCGAGAGCG CCACCTACAG CACGCTGCTC GCCCGGCTGC GCGACAGCGA TGGCCACTAC GTCGACGCCG ACGAGCTGCG CGCGGCGCAC GAACCCGGAC GCGAGGACGG CGAAGGCGAC CGCGCGGACG AGATCCCGAG CTTCGATCCC GACACCGTGG GCGCGCTGCG CCGCCAGCTC GAGTCGATGA ACGCGGGCGT GGTGTTTCCC ATGTACGGCT CGGCCGCGAC CGAGCAGGGA CCGTGGCTGC TGGGTCTGCT GGTGGTGCGC GACGCCCGCA CCGACAGCGC CTTCGACCGC GACGACCTCG ACCTGTTTCG CCAGCTCGCG ACTCAGGCGG CGCGCACCAT CGAGGCCAGC GAGGCGTTTA CGCGGGTCAA GGAGCGCGAT CGCCTGGCCG CCATCGGCGA GCTGAGCGCC GGCCTGGCGC ACGAGATCCG CAATCCCCTG GGCGCGATCA AGGGCGCGGC CCAGCTCCTG GTCGGCCCCG ATGGCGAGCC CGCGCCGCCC AGCGCCGAGT CGGTGGAGTT CGTACAGATC ATCATCGAGG AGGTCGATCG CCTCAACAAC GTGGTCTCGC AGTTCCTCGA CTACGCGCGC GCGACCGGCA GCGACACGCA CAAGCATCGG CCCATCTCGA TGAACGAGGT CATCGACAAG ACAGTCCAGA TCCTGCGCCG CGATGCGCCC GACAATGTCG CCATCCGCGT CCACGTGGAC GAGCTCCTGC CGCCGGTCTC GGGCGACGCG GCCACGCTGC TGCAGGTGTT CCTCAATCTC GGCCAGAACG CGATCCAGGC GATGGCCGAG AGCGGCGGTG TGCTCGACAT CTTGACCACG CGCCGCCGCC GCTCGCGGCT GGGTTACGGC TCCTTTGCCG AGGCGCGCTT CCGCGACAGC GGCGTGGGCA TCGCCAGCGA CGTGGTCGAC AAACTCTTCA TCCCCTTCTT CACCACCCGC GAGAAGGGCA CCGGCCTGGG CCTGCCCATC TCCGAGCGCA TCGTGAGCGA GCACGGCGGC ACCATCGAGG TGCGCGCCAA TCCCGAGGGC GGCTCGACCT TCTCGGTGTT CCTGCCCGCG CTGGGGCCCT CACGCCCGCC GGCCGACGAG CCCACGCCGC CGCCGCTGCC GCTGCCGTGG CCGAGGCCGA ACGCGGACGG AGACGCGGCC AGCGAGACCG ATGGCGAACG CGGCCGGGGA AGCGAGTAA
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Protein sequence | MAVPGNIQAI SALLSSILIV VIGVSVLLRD RTQRTYTSFA AFTIVLSSWH LCSFIATVTD SSTVRWLALW PAATIPPTAV AFFREFLSQP SIGGKRRPPR VTLAWTILAC LALIYAGFIP IHETLFFQIP FGVYVFGGLY RCVYDTYKQY RATVKRVERV RVRYVLIGGF LATTFALIDV LPRFGVAWPA LGNVFTILYL YFLSQSLFRY QLIDINELIG KMAVLGTLVA LLWAVYGLLL AWIGRGQEGL FLLNALVASF VILLLYEPVR SRLENGIHRW LLRQRTELRG RIERLGRELL RVTHVDEMAS LILTALEESR RVTHAAVYLL DSAGAGYDRK GYYGTAPIER IESATYSTLL ARLRDSDGHY VDADELRAAH EPGREDGEGD RADEIPSFDP DTVGALRRQL ESMNAGVVFP MYGSAATEQG PWLLGLLVVR DARTDSAFDR DDLDLFRQLA TQAARTIEAS EAFTRVKERD RLAAIGELSA GLAHEIRNPL GAIKGAAQLL VGPDGEPAPP SAESVEFVQI IIEEVDRLNN VVSQFLDYAR ATGSDTHKHR PISMNEVIDK TVQILRRDAP DNVAIRVHVD ELLPPVSGDA ATLLQVFLNL GQNAIQAMAE SGGVLDILTT RRRRSRLGYG SFAEARFRDS GVGIASDVVD KLFIPFFTTR EKGTGLGLPI SERIVSEHGG TIEVRANPEG GSTFSVFLPA LGPSRPPADE PTPPPLPLPW PRPNADGDAA SETDGERGRG SE
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