| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5549 |
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| Symbol | |
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| ID | 8547963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7615560 |
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| End bp | 7618136 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 646390223 |
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| Product | primosomal protein N' |
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| Protein accession | YP_003269925 |
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| Protein GI | 262198716 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.293579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGATT CGGCCGGCAG TCCGCTTCTG CCCCTGTCGC CCGCCGCCGC GGCCGCCGAC
GCTCGCACAG ACGCCAGCGC CGACGCCGGG CGCTACGCCG AGCTGGCGGT GCAGGCGCCG
GTGCGCGGCA GCTTCTGCTA CGAGGTCCCC GAGCGGCTGC GCGGCCGGCT GGTGCGGGGC
TCGCGCGTGC TCGTGCCCTT TGGCGGCCGC GGCCTCACCG GCGTGGTGCT GTCGCTCGCC
GAGGCGCCGC CGGCCGAGGT CGACCCCGCC CGGGTGCGCG CCATCGACGG CCTGCTCGCC
GACGAGGAGC CGGTGCCGGT CGAGCTGCTC GAGCTGTGTC TGTGGGCGGC CGCGTACTAC
GAGGCGCCGC CCGGCGAGGT GCTGCGCGCG GCGCTGCCGG TGGGCGCGCA GGTGAGCGCC
CAGCAGGTGG TCGAGCTGAC AGAGACCGGC GAGCGCGCGC TGGCCGGGGA GGGCGGGGCG
CTGAGCGCGC GCCAGCGCGA TGTTCTCGGA CGCCTGTCCC AGGCCGGCGG CAGCATGTCG
CGCAAGGCGC TGCTGGGCCG CGCCAAGGAC GGCGAGCGCG GCCGCGCGCG GGCGCTGCGT
GCGGCCGATA TCGCCCCGCT GGTCGAAGAA GGCCTGGTCC GCTACCGGCG CGAGGCCGAT
CGCGCGCGCG TGCGCACCCG CACCGAGCGC ACCGCGGTGC TCTCGCGGCC GCCGAGCGAC
GACGAGCGCA TCGCGCTCAT CCGCGCGCCC AAACGCGCGG CCGCGCTGTC GGCGCTCGAG
CGCGCGGGCG GGGCCGCGGC CGTGAGCGCG CTGCGCGAGC ACGAGCCCAA CATCGCCAGC
CACCTGCGCG CGCTCGCCGG CCTCGGCCTG GTGCACTTCG AGCAGCGCGC GGCCGAGGGC
AGCAGCTACG CGCCCGATGA CGGCCTCTCG GCCAGCGCCG CGCCGCCCGC GCTCACCGAC
GCGCAGCGCG CGGCCCTGGG CGCGATCTCG GGCGGCCTCG CGGGCGCGGA CTTCGCCGCC
TACCTGCTGC ACGGCATCAC CGGCAGCGGC AAGACCGAGG TCTATCTGCA CGCCATCGCC
GAGGCGCTGG ACAGCGGCCG CACGGCCATC GTGCTGGTGC CCGAGATCTC GCTCACGCCG
CAGCTCGCCG CCCGCTTCCG CGCGCGCTTC GGCGACCTGG TGGCGGTGCT GCACAGCGGC
CTCACCGACC GCGAGCGCTT CGACGAGTGG CAGCGGCTGC GCAGCGGCTC GGCGCGCATC
GCGCTGGGCG CGCGCTCGGC CGTGTTCGCG CCGGTCGAGC GGCCGGCCAT CATCGTCGTC
GACGAGGAGC ACGACAGCTC GTTCAAGCAG GAGGAGGGCG TGCGCTACAA CGCGCGCGAC
GTCGCCCTGG TGCGCGCGCA GCGGGTCGGT GGCGTGTGCG TGCTGGGCTC GGCCACGCCC
TCGACCGAGT CGTACTGGGC GGCCGAGAGG GGCCGCTACC AGCTCCTGAC CTTGCCCGAG
CGGCCCACGC CGCGGCCGCT GCCCACGGTC GAGCGCATCG ATCTGCGGGT GTACAAGGCC
GAGTCCGAAG ATATGCTGAC CGCGCCGCTG CGCCAGGCCA TCGCCGAGAC CCTGGCGCGC
GGCGAGCAGG TGATCCTGTT CCTCAACCGC CGCGGCTTCG ACACCTTCGT GCTGTGCCGG
GCCTGCGGCG AGGCGCTGCG CTGCCAGCAG TGCTCGGTCT CGCTCACCTA TCACCGCGCG
CGCAACATGC TGCTGTGCCA CTACTGCGGC TATCAGCGCC GCGTCCCCGA GCAGTGCCCG
AGCTGCCGGG CGCCGGGGAC GATCCTGCGC AAGGGGTTGG GCACCGAGAA GGTCGCCGAC
GCCGTGGCCG AGCGCTTTGC GCCGGCGCGG GTGGCGCGGC TCGACCGCGA CGTGGCCACG
GGCGCGCGTA TCGGCGAGAT CCTCGGCCGG GTGGCGCGGC GCGAGGTCGA CATCCTGGTC
GGCACGCAGA TGGTCACCAA GGGCCACGAC TTCCCCGGCG TCACCCTGGT CGGCGTGCTG
TGCGCCGACA CCGGGCTGTC GCTGCCCGAT TTTCGCGCCT CGGAGCGGAC CTTTCAGCTC
CTCACCCAGG TCGCCGGACG CGCCGGTCGC GGCGAGCGTC CGGGCCGCGT GCTGATCCAG
AGCTTCCGCC CCGAGGCCGT GGCCATCGCG ACCGCGGCGC AGCACGACTA TGCGGCCTTC
TACCGCGCCG AGCGCGAGGC TCGCGAGGAG TTTGGCTATC CGCCCTTTGG TCACTTCGTG
GCCCTGCGCC TCGACGGCAC CGACGCGCTC GCGGTCGAGC GCACGGCCGA GCTGTTGATC
CAGCGCGTGC GCGGCTCCGG GCTCGACGCC GGGATCACGG TGCTGGGCCC GACCGAGGCG
CCGCTGGCGC GCATCAAGGG TCGCACGCGC TGGCATCTGT GGCTGCTGGC CGAGGCCCGG
CCGCCGCTGC GGCGCCTGAT CCACGCGGTG CTGTACGGCG ACATCGCGGG CGCGAGCGCG
CAGCTCCCGG CCGAGGTGCG CGTGAGCGTG GACGTCGATC CGGTCAGCGC CTTGTAG
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| Protein sequence | MSDSAGSPLL PLSPAAAAAD ARTDASADAG RYAELAVQAP VRGSFCYEVP ERLRGRLVRG
SRVLVPFGGR GLTGVVLSLA EAPPAEVDPA RVRAIDGLLA DEEPVPVELL ELCLWAAAYY
EAPPGEVLRA ALPVGAQVSA QQVVELTETG ERALAGEGGA LSARQRDVLG RLSQAGGSMS
RKALLGRAKD GERGRARALR AADIAPLVEE GLVRYRREAD RARVRTRTER TAVLSRPPSD
DERIALIRAP KRAAALSALE RAGGAAAVSA LREHEPNIAS HLRALAGLGL VHFEQRAAEG
SSYAPDDGLS ASAAPPALTD AQRAALGAIS GGLAGADFAA YLLHGITGSG KTEVYLHAIA
EALDSGRTAI VLVPEISLTP QLAARFRARF GDLVAVLHSG LTDRERFDEW QRLRSGSARI
ALGARSAVFA PVERPAIIVV DEEHDSSFKQ EEGVRYNARD VALVRAQRVG GVCVLGSATP
STESYWAAER GRYQLLTLPE RPTPRPLPTV ERIDLRVYKA ESEDMLTAPL RQAIAETLAR
GEQVILFLNR RGFDTFVLCR ACGEALRCQQ CSVSLTYHRA RNMLLCHYCG YQRRVPEQCP
SCRAPGTILR KGLGTEKVAD AVAERFAPAR VARLDRDVAT GARIGEILGR VARREVDILV
GTQMVTKGHD FPGVTLVGVL CADTGLSLPD FRASERTFQL LTQVAGRAGR GERPGRVLIQ
SFRPEAVAIA TAAQHDYAAF YRAEREAREE FGYPPFGHFV ALRLDGTDAL AVERTAELLI
QRVRGSGLDA GITVLGPTEA PLARIKGRTR WHLWLLAEAR PPLRRLIHAV LYGDIAGASA
QLPAEVRVSV DVDPVSAL
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