Gene Hoch_5508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5508 
Symbol 
ID8547921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7552997 
End bp7553311 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content69% 
IMG OID646390181 
ProductRieske (2Fe-2S) iron-sulphur domain protein 
Protein accessionYP_003269884 
Protein GI262198675 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.358971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCTTCC GCGTACGCGT GTGCAGCCTC GACGAAGTCG CCCCGGGCGA ATCGCGCGGC 
TTTCAGGTGC CGGGCGTGAC CCTGCCGATC ATGGTCACCA ACCTCGATGG CGAGTACCTG
GCCAACGCCA GCATGTGCCC GCACGAGGAT GTGTCGCTGC TCGGCTGTAA GCGGCGCGGC
GCGACCGTCT TCTGCCGCGG CCACGGCTAC CGCTTCGACC TGCGCAGCGG CGCGTGCAGC
CACGACGCCA AGCTCACGCT GCGGCGCTAT CGCAGCACCG TCATCGACGG CGCGCTGTAC
GTCGACCTGG TCTGA
 
Protein sequence
MAFRVRVCSL DEVAPGESRG FQVPGVTLPI MVTNLDGEYL ANASMCPHED VSLLGCKRRG 
ATVFCRGHGY RFDLRSGACS HDAKLTLRRY RSTVIDGALY VDLV