Gene Hoch_5496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5496 
Symbol 
ID8547909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7540542 
End bp7542449 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content69% 
IMG OID646390169 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_003269872 
Protein GI262198663 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.252703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC AACACCTTTT CCAGCGCAAG ACGAGGAGCA TTTACTGGCT CCTCTTGATT 
TCTGCCATGG TCGCTCTCTG GTGCTCGGCG CGCTCGCAAC CCAGCGAAAC TGCCGATTCC
CGCCAGGATG CGCGAGACGC TGCACAGGCC GCAGCCGGTG GCGACAGCGC CGCCGCGGAC
TGGTTAGCAG ACATCGATCC CGACGATATC CTCATCGACT TGCGCGACGA CATCTCTAGT
GATGTGGTCG CCGATATCGA AGCTCGTTTT GACCTCGATC TAGAGCTGGT CTCGGCGCAG
TCCGAGGACG AGCGCCTGTA CCGGGCGCAC GTGGCGCCAG CTCGTCGCGA CGCCGTGTTG
CACGCGCTGT CCGAGCTGCC CGCGGTCGAG ATCGCGGAGC CCGACGCCTC GGTTCAGCTC
GGTCCGGTCG CGGACTTCGC CGCGGCGCCG GCCGTGGACG ACGACATCGA TTGGGATTCT
TATCCCAATG ATCCGATGTT CAAGTTCCAG TGGCACATGA ACCAGATCGG CATGCCCGAG
GCCTGGAAGA TGGCCGACGG CGACGGCGTC ATCGTCGCCG TGATCGACAC CGGCGTGGCG
CACGGCGCCC AGGGCCGCTT CCACGTGGTC CCCGACCTCG ACGGCGTGCC CTTCGTCAAG
CCGTACAACT TCGTGAACAA CAACGAGCAG GCGCACGACG ACCACGGCCA CGGCACCCAC
GTGGCCGGCA CCATCGCCCA GCTCACGCAC AACGGCGTGG GCGTGGCCGG CATCGCCCGC
AAGGTGCAGA TCATGCCGCT CAAGGTGCTC AGCGCCAGCG GCAGCGGCAG CGTCGCCGCC
ATCGCCGACG CCATCCACTA CGCCGCCGAC AACGGCGCCA AGGTCATCAA CATGAGCCTC
GGCGGCCGCT TCCCCTCGCG CATCCTCAAG AAGGCGGTCG AGTACGCCCA CGACCAGGGC
GTCGTGGTGG TGTGCGCCGC CGGCAACGAC GGCCGCGCCA AGGTGAGCTA CCCGGCCGCC
TACCCCGGCG CCTTCGCCGT CGCGGCCACG CAGTACGACG AGACCACGAC CTTCTACTCC
AACTGGGGCA AGGAGATCGC CATCGCCGCT CCCGGCGGCA ACACCCGCGT GGACCAGAAC
AACGACGGCA TGCCCGACGG CGTGTTGCAG AACACCATCG CCATCGGCGA CCCCACGCAG
AACGACTATT ACCCGTACAT GGGCACCTCG ATGGCCTCGC CGCACGTCGC CGGCGTGGCC
GCGCTGGTGG TCGGCGAAGG CGTCACCGAG CCGGCCGCGG TCGAGCGCAT CCTGCGCGAG
TCGGCGCGCG CGCCCGCCGG TCACAGCTCC TTCGATGAGA AGCGCTACGG CGCCGGCATC
ATGGACGCGC CCGCGGCCAT CGAGAAGGCG CGCGCCGCCA CCGGCGGCTG GCAGCTCCTG
CTCGGCCTGC TGGTGGCCGG CGGCCTGGCC GCCTCGGTGC GCCGCCGCGG CCTGCTGTTC
GCGCCGCTGG GCCCCACCTA TCTGCTCGGC GTGATGGTCG GCGCCAGCGG CCTGTTCTTC
CTGCCGTATC TGGGCCTCTC GCTCGAGGGC ATGTTCCTCG GCGACCTGCT CACGCGCGGC
CTGCCCTCGT GGGATCTGGC GCTCTTTGGC CCGGCCGGCC ACGGCAACGC GCTGTTCTTC
AGCGCGCTCA TCCCGCTGGG CCTGGTCACC GCCCTGTACG GCGTCCGCCG CCTGCGCGCG
CCCCTGGCCG GACTGGCCGC CGGTATCGCC GGCCACCTGC TGTTCCACGC GGTCGTGCGC
ATCATCGACA TCCAGTACGT GCCCAACGCG CTGATGCTCG ACGAGCTGTG GCTGGGCCTC
AACGCCCTGC TGTGCCTGGG CCTGGGCTTC CTGGTCCTGC GCCGCTAA
 
Protein sequence
MSEQHLFQRK TRSIYWLLLI SAMVALWCSA RSQPSETADS RQDARDAAQA AAGGDSAAAD 
WLADIDPDDI LIDLRDDISS DVVADIEARF DLDLELVSAQ SEDERLYRAH VAPARRDAVL
HALSELPAVE IAEPDASVQL GPVADFAAAP AVDDDIDWDS YPNDPMFKFQ WHMNQIGMPE
AWKMADGDGV IVAVIDTGVA HGAQGRFHVV PDLDGVPFVK PYNFVNNNEQ AHDDHGHGTH
VAGTIAQLTH NGVGVAGIAR KVQIMPLKVL SASGSGSVAA IADAIHYAAD NGAKVINMSL
GGRFPSRILK KAVEYAHDQG VVVVCAAGND GRAKVSYPAA YPGAFAVAAT QYDETTTFYS
NWGKEIAIAA PGGNTRVDQN NDGMPDGVLQ NTIAIGDPTQ NDYYPYMGTS MASPHVAGVA
ALVVGEGVTE PAAVERILRE SARAPAGHSS FDEKRYGAGI MDAPAAIEKA RAATGGWQLL
LGLLVAGGLA ASVRRRGLLF APLGPTYLLG VMVGASGLFF LPYLGLSLEG MFLGDLLTRG
LPSWDLALFG PAGHGNALFF SALIPLGLVT ALYGVRRLRA PLAGLAAGIA GHLLFHAVVR
IIDIQYVPNA LMLDELWLGL NALLCLGLGF LVLRR