| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5459 |
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| Symbol | |
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| ID | 8547872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7492446 |
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| End bp | 7493990 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646390132 |
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| Product | Carotenoid oxygenase |
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| Protein accession | YP_003269835 |
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| Protein GI | 262198626 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.176097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.349671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAGC TGTACTCCAC TTCACACGCC GCGGCCGCCA ACGCTCACGC CGCAGCCGAC
ACCTCGCCGT CGGCCGCGCC TGCGCATACA GCCGACGGCG AGGGGGTACA GGCGCCGCCC
TGGGCCAACG CCTTCCGCGA GCTCACACGC GAGCACGATT TTCAGCCGCT TCGGGTCGAG
GGCGTACTAC CGCCTGATCT CGAGGGCAGC TTCTACCAGA ACGGCCCGGT GCTGTTCTCG
TCCCACGGAT ACCGCTACAC CCACTGGTTC GACGGCGACG GCGGCGTCTC GGCGGTTCGC
CTGCAGGCCG GCCGCGCCCA CGGCGCCGCT CGGGTCACGG CCACGGCCGG CCTGATCGCC
GAAGCGCGCG CGGGAAAACG CCTCTACGGC GGCTACAGCT CACCGCAGCC GGGCGCGGTG
AAACGCCTCC TCGGCATTCT CAAGAACACC GCCAACACCT CCATGCTGGT GTGGAATCGG
CGCCTGTTCG CGCTCATGGA GGCGGGACTG CCCACCGAGA TCGCGCCCGA GGACCTGCGC
ACCCTGGGCG AGCGCGACCT CGGCGCGATC ACGCACGTGT TCTCAGCCCA CCCGCACTGG
TGCGCGCGCC GCAACACCTA CTACGGCTTT GGCGTGCGCC CGGGCCGCCA GCAGCAGCTC
GACATCTTCG AGCTAACCCA CACCGGCGTG GCGCGCCCCC TGTGTTCGGT CCCGCTGTCC
GAACACACGC TGATCCACGA CTTCGCGATC ACGGGCCGCT ACCTGGTGTT CTTCGCCCCG
CCCTTCGAAC TGCGCGCCTG GCGCATGCTC GCCGGCGAGG GCGGCTACGC CGACAATTTG
CAGTGGAAGC CCGAGTACGG CACCGAGATC ATCGTGGTGC CCATCGACCT GCCGCACGCG
GTGCAGCGCT TTCGCGTCGA TCCCTTCTTT CACTGGCACG TGGCCAACGG CTTCGACGAC
GGCGACGACA TCGTGGTCGA CTTCGTCCGC TACGACGACT TTGAAAACAA CGCGTTCCTC
GCCGACTTGC CCGCGGGCAA CGACACCCGC AACCTGGGCA GCAGGCTGGT CCGCGCCCGC
ATCTCGCTCG CCAACACGCG CATGCGCCGC GAGGAGCGCT GGAGCCGCTC GGTCGAGTTT
CCCCAGATCC GCCAGGATTA TTTCGGACGA CCGTACCGCT ACTGTTACCT GGCCGCCTAC
GAGGACGGCG CCCCCGACAG CGGCCTGCAA AACGTGCTCG CCAAAGTCGA CATGCACAGC
GGCGAGGTCC GCGAGTACAC CTGCGCGCCC GGCCGCTACC TGACAGAGGC CGTGTTCGTG
CCGCGCGCCA CCGGGGCCGA CGCTGGCGAA TCACCCGAGG ACGACGGCTA TCTGCTCACC
ATGGTCTACG ACGCCAACAG CCACACCAGC CACCTGGCCG TCTTTGATGC CGGCGATATC
GAGGCCGGCC CGCGCGCGCG CACGCACTTC GATCACCACA TCCCGCCGCG CTTTCACGGC
GCGTGGATGC CGGTGAGCCA GTATCCGCAC ATGCGCGGCC GCTGA
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| Protein sequence | MKELYSTSHA AAANAHAAAD TSPSAAPAHT ADGEGVQAPP WANAFRELTR EHDFQPLRVE
GVLPPDLEGS FYQNGPVLFS SHGYRYTHWF DGDGGVSAVR LQAGRAHGAA RVTATAGLIA
EARAGKRLYG GYSSPQPGAV KRLLGILKNT ANTSMLVWNR RLFALMEAGL PTEIAPEDLR
TLGERDLGAI THVFSAHPHW CARRNTYYGF GVRPGRQQQL DIFELTHTGV ARPLCSVPLS
EHTLIHDFAI TGRYLVFFAP PFELRAWRML AGEGGYADNL QWKPEYGTEI IVVPIDLPHA
VQRFRVDPFF HWHVANGFDD GDDIVVDFVR YDDFENNAFL ADLPAGNDTR NLGSRLVRAR
ISLANTRMRR EERWSRSVEF PQIRQDYFGR PYRYCYLAAY EDGAPDSGLQ NVLAKVDMHS
GEVREYTCAP GRYLTEAVFV PRATGADAGE SPEDDGYLLT MVYDANSHTS HLAVFDAGDI
EAGPRARTHF DHHIPPRFHG AWMPVSQYPH MRGR
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