Gene Hoch_5438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5438 
Symbol 
ID8547851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7463022 
End bp7463714 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content71% 
IMG OID646390111 
ProductPhosphoglycerate mutase 
Protein accessionYP_003269814 
Protein GI262198605 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0736619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGCGA TCTATCTCAT CCGTCACGGC CAGGCCTCAT TCGAGGCCGA GGACTACGAC 
CAGCTCTCGG CCAAGGGCGA GCAGCAGGCG CGCATCCTGG GCACGGCCTT GCGCCAGCGC
CTGGGCAGCG CCGATGTGCG CGTGAGCGGC TCGCTGCGCC GCCAGCAGCA GACCGCGGCC
GCGTGCATCG AGGCCTACGA GCAGGGCACC GGCGTGGACA CCGATCCCGG CTGGAACGAG
TATGACGACC GCGCCATGCT GCGCGCCTTC GAGCCCTCGT TGACCTCGGG CGCCGCGCTC
CAGGACTGGC TGCGCCAGCG CAGCGACCCG CGCGCGGCCT TTCAGGAGCT GTTTCTGCGC
GCGGCCACGC GCTGGAGCAG CGGCGAGGCC GACGGCGACT ATCAGGAGAG CTGGACCGGC
TTCCGCGAGC GCGTCGGGGC CGCGCTCGAG CGCGTGCAGC AGCGCCTCGA GCGCTCGCAG
CAGGCGCTGG TGTTCACCTC GGCCGGCGTG ATCGCGACCG TGTGCGGCAT ACTGCTGTCG
CTGCCCGCGG CGCAGGTCCT GCAGCTCAAC TGGACCATCG CCAACGCCTC GGTCACCAAG
CTGCTGGTCG GTCGCTCCGG GCTGTCGCTG TCGAGCTTCA ACGAGCACGC GCATCTCGAG
ACGCCCGAGC GCGCGATGAT CACCTACCGC TGA
 
Protein sequence
MGAIYLIRHG QASFEAEDYD QLSAKGEQQA RILGTALRQR LGSADVRVSG SLRRQQQTAA 
ACIEAYEQGT GVDTDPGWNE YDDRAMLRAF EPSLTSGAAL QDWLRQRSDP RAAFQELFLR
AATRWSSGEA DGDYQESWTG FRERVGAALE RVQQRLERSQ QALVFTSAGV IATVCGILLS
LPAAQVLQLN WTIANASVTK LLVGRSGLSL SSFNEHAHLE TPERAMITYR