Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5388 |
Symbol | |
ID | 8547800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 7406874 |
End bp | 7407611 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 646390061 |
Product | hypothetical protein |
Protein accession | YP_003269765 |
Protein GI | 262198556 |
COG category | [S] Function unknown |
COG ID | [COG2912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.666876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.357549 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACTC AGTCCCCCAG CCTGACCTTG TTCGCACACG TGGCCAACCG CCCCGAGGAC GACATCGAGC TCGACGTCGC CGCCCTGCTG GTCGCCGAGT GGGAATACGA CAACCTCGAC GTGAGCCGCT ACGTGGCCGC GCTCGACGAC TTCGCCGAGC GCACCCTGGA GGCCCAGCGC GACCGCCCCG ACGCCGACTT CCCGGCCATT CGCGCGCTGC ACAGGACCCT GTTTCGCGAT CTCGGATTCC GCGGCAACGA AGATAATTAC TACGACCCGC GCAACAGCTT CCTGCACCAG GTGATCGAGC GCCGCACCGG CCTGCCCATC ACGCTCTCGG TGCTGTACAT CGAAGTGGCG CGCCGCATCG GACTCGAAGT TCGCGGCGTG AGCTTTCCCG GCCACTTCCT GGTCCGCCAC GACAGCGCCT ACGGCACCGT CATCATCGAC CCCTTCCACC TCGGCCGCAC CCTCGACAGC GGCGAGCTCG ACGAGCTGGC CAAACGCGCC TGCGGCCCCG AGGTCGAGCT CGATCCCGAC ATGCTGGCGC CGGCCAGCAA GCGCGATATC CTGCTGCGCA TCCTGGCCAA CCTGTCGCGC ATCTACGAAC AGCGCGGCGA CATCGTCCGC GCCCGCGCCG CGCTCGAGCG CATGCAGGTG CTCGACCCCA GCAGCAAGCG CATCGCGGGC AAACTCGACG CCCTGCACGC CGGACCCGGC TCGGCCGGCC CCAACTGA
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Protein sequence | MATQSPSLTL FAHVANRPED DIELDVAALL VAEWEYDNLD VSRYVAALDD FAERTLEAQR DRPDADFPAI RALHRTLFRD LGFRGNEDNY YDPRNSFLHQ VIERRTGLPI TLSVLYIEVA RRIGLEVRGV SFPGHFLVRH DSAYGTVIID PFHLGRTLDS GELDELAKRA CGPEVELDPD MLAPASKRDI LLRILANLSR IYEQRGDIVR ARAALERMQV LDPSSKRIAG KLDALHAGPG SAGPN
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