| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5358 |
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| Symbol | |
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| ID | 8547770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7371826 |
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| End bp | 7373016 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 646390031 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003269735 |
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| Protein GI | 262198526 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCGCC GTCACTGGAA GCGCCTCGCC GTGTTCGCGA CGGTGCTCGT CCTGGTCTGG
CTGGGCGTGC GCCAGTGGCG TGGCGACGCG GTCGAGGTGG TGCAACTGCA GCCGCGCACG
CTGATCCAGA CGGTGGTGAC GCCCGGTCGC GTGGCGCCTC CTTTTGAGAT CCGGCTGGCC
GCGCTCGCGG CCGCGCAGGT GCTCGCGGTC GAGGTCGAGG AGGGCGAGCG GGTGACAGCG
GGGGCGCTGC TGGTGGCCTT CGACGACGCC GAGGCGCGCG CCCAGGTCGC CGAGGCCGAG
GCTCAGGTGG CGCAGGCGCA GGCGCGTGCT CGCGGCGTGC GCGTGCTCGA CGCGCCGGCC
TCGCTGGAGT CGTTGCGCCA GGGCCAGGCC GAGCTGGCCG AGGCCGAGAG CCAGTGGGCG
CGGACCCAGT CGCTGTTCGA CGCCGGCACC ATCAGCGCGG CCGAGCGGGA CAGCGCGCGC
ACGCGCCTCG ACCTCGCGCG CAGTCGCGTG CGCACGGCCG AGCTCGAGCT CGCAGCGCGT
CGCGGCGGCA GCGCGTTGCA GGCGGCGCAG GCCGAGCTGG CCCTGGCCGA GTCGCGTCTG
GCCGCGGCAC GTGCGCGTCT CGAGCGTCTG AACCTGCGCG CACCGGCGGA CGCGACCGTG
GTGCGCCGGG CGGTCGAACC CGGTGAGACC GTGAGCCTCG GGACCGAGCT CTTGGTGCTC
GCGCGCGCGG GCGGGACCCA GATCATCGTT GAGCCCGACG AGAAGAATCT GCCGCTGCTC
GCTCTCGGGC AGCCGGCGCT GGTATCGGCC GAGGCCTTTG CCGCGCAGCG TTTTGCCGCC
GAGGTGTCGT TCATCGCGCC GGCCGTCGAT CGCATGCGCG GCACGATCGA GCTCAAGCTC
GACGTCCCTG AGCCGCCGGC GTATTTGCGC ACGGATATGA CCGTATCGGT CGAGATCGAG
GTCGCGCGCC GCGAGCGTGC GCTGGTGTTG CCCGCGGAGG CCGTACGCGA CCTCGGTCGC
GGGCAGCCGT GGGTGCTCGT CGTCGAGCGC GGACGCGCCG TGCGCCGCGA GGTGAGCGTC
GGCGTGCGCG GCGAGGGCGC GGTCGAGATC GTCGACGGCC TGGAGCCGGG CGACGAGGTC
GTGGCTGCTG GTGAAACTGT CGAACCAGCG GCGCGCGTGC GCGCCCGGTG A
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| Protein sequence | MLRRHWKRLA VFATVLVLVW LGVRQWRGDA VEVVQLQPRT LIQTVVTPGR VAPPFEIRLA
ALAAAQVLAV EVEEGERVTA GALLVAFDDA EARAQVAEAE AQVAQAQARA RGVRVLDAPA
SLESLRQGQA ELAEAESQWA RTQSLFDAGT ISAAERDSAR TRLDLARSRV RTAELELAAR
RGGSALQAAQ AELALAESRL AAARARLERL NLRAPADATV VRRAVEPGET VSLGTELLVL
ARAGGTQIIV EPDEKNLPLL ALGQPALVSA EAFAAQRFAA EVSFIAPAVD RMRGTIELKL
DVPEPPAYLR TDMTVSVEIE VARRERALVL PAEAVRDLGR GQPWVLVVER GRAVRREVSV
GVRGEGAVEI VDGLEPGDEV VAAGETVEPA ARVRAR
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