Gene Hoch_5307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5307 
Symbol 
ID8547719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7300099 
End bp7300833 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content70% 
IMG OID646389981 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_003269685 
Protein GI262198476 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACCTCC GGGTCCTCAC CTACAACATT CACAAGTGCA TCGGCGGCGT CGACCGCCGC 
TACAATCCCG AGCGCGTCCG CGACACCATC GCCCACTACG ACCCCGACGT GGCGCTGCTA
CAAGAGGTCG ACCACCTGGT GCCGCGCTCC AATCGCGATC GCCAGGTCGA CGTCCTCGGC
GACCTGCTCG GCTATCGCCA CCGCACCTAC TTCCCCAACG TGCGCGTGCG CGGCGGCGGC
GAGTACGGCA ACGCCATCCT CAGCCGCTAC CCGCTCACCC ACACCCGCAA CATCGACCTC
ACCGTCGGTC TGCGCAAGCG CCGCAGCGTG CTGCACGCGC GCTACCGGGT GCGCCTGCCC
AGGTCGCGGA GCACGCGCAC GGTGCACGTC TTCAACATGC ACCTCGGGCT CGCCGGCGGC
GAGCGCAAGC TGCAGCTCCA GCGCTTCCTC GACAGCCACC CCTTCACCGG CTTCCACCAG
CACACGCCCG TGATCGTCGG CGGCGACCTC AACGACGTGT GGGGCACCCT GGGCCCCAAA
TTTCTGCTGC CGGCCGGCTT TCGCCGCATG CCCAAGTCGC CGCGCACCTT CCCGGCGTAC
GCGCCGATGC GCGCGCTCGA CGGCATCTAC GTGCGCGGCA GCGCCGAGAT GCGCAAGCTG
CAGCGCGGCC AGATCGCGGT CGCCCGCGAG GCCTCCGACC ACCTGCCGCT GATCGCCGAT
ATCGAGATCA CCTGA
 
Protein sequence
MHLRVLTYNI HKCIGGVDRR YNPERVRDTI AHYDPDVALL QEVDHLVPRS NRDRQVDVLG 
DLLGYRHRTY FPNVRVRGGG EYGNAILSRY PLTHTRNIDL TVGLRKRRSV LHARYRVRLP
RSRSTRTVHV FNMHLGLAGG ERKLQLQRFL DSHPFTGFHQ HTPVIVGGDL NDVWGTLGPK
FLLPAGFRRM PKSPRTFPAY APMRALDGIY VRGSAEMRKL QRGQIAVARE ASDHLPLIAD
IEIT