| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5286 |
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| Symbol | |
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| ID | 8547698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7265708 |
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| End bp | 7267087 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646389960 |
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| Product | cystathionine beta-synthase |
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| Protein accession | YP_003269664 |
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| Protein GI | 262198455 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0031] Cysteine synthase |
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| TIGRFAM ID | [TIGR01137] cystathionine beta-synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.153908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATGG ATCAGATTCA CAATTCGATC TGCGACGCAG TGGGGCGGAC CCCGGTCGTA
CGTTTGTCCC GTTTCGGACG CGATCTGCCG TGTGAGCTGC TCGCCAAGTG CGAGTTCATG
AACCCCGGCG GTTCCGTCAA AGACCGCATC GGCGTGCGCA TGATCGAGGA CGCCGAGGCC
GCGGGGCGCA TCAAGCCGGG CGACACGCTC ATCGAGCCGA CCTCGGGCAA CACCGGCATC
GGTCTGGCGA TGGCGGCCGC GGTCAAGGGC TACCGGGTGA TCATCACCAT GCCCGAGAAG
ATGAGCCAGG AGAAGCAGGT GGTGCTCGAG GCGCTGGGCG CCGAGATCAT CCGCACGCCC
ACGGAGGCGG CCTGGGATTC GCCCGAGAGC CACATCGGCG TGGCCAAGCA GCTCAAAGAG
GTGATTCCCA ACGCCCACAT CCTCGACCAG TACGCCAACC CGAGCAATCC GCTGGCGCAC
GAGGAGGGCA CCGCGCGCGA GATCCTCGAG CAGTGCGGCG GCAAGCTCGA CGTGGTGGTG
ATGACGGCCG GTACCGGCGG CACCATCTCG GGTGTGGCGC GCGCGCTCAA GGCCGCGCTG
CCGACGATCG AGATCGTCGG CGTGGACCCG GAGGGGTCGA TCCTGGCCGG TCCCGGCGAG
ATCAAGAGCT ACAAGGTCGA GGGCATCGGC TACGACTTCA TCCCCGATGT GCTCGATCGC
GGTCTGGTCG ACCGCTGGAT CAAGAGCAAC GACCGCGACT CGTTCCGCAC CGCGCGCCAG
CTCATCCGCC AGGAGGGCCT GCTGTGCGGC GGCTCGTGCG GCGCGGCGGC GTGGGCGGCG
GCCAAGGTGT GCCGCGAGCG CCAGCCCGGC GAGCGCGTGC TGGTGATCCT GCCCGACTCG
ATCCGCAACT ACCTCACCAA GTTCGCCGAC GAGCACTGGA TGCGCCAGCA CGGCTTTGCC
CAGTCCGAGT GGGAGATGGG CAGCATCGCC GATATCGTGC GCTGTCTGCC GCCGCGCGAG
GTGCTGTCGG TGAGCACCTC GGCGACCCTG GGCGATGCGC TCGAGCGCTT CCGCGACAGC
GGCGTATCGC AGATGCCGGT GCTCGACGGC GAGCAGGCGC TGGCCGGCAT CGTCACCGAG
ACCGACATGC TGCATCACCT GGTGAGCGGG CGCGCCAGCC ACGACACCTC GGTGGTCGAG
ATCATGGAGC GCCGGGTGAC GACCGTGGGC ATGCACGCGC CCGCCAGCGA GCTGCCGCGC
ATCTTCGACC GGGGCCAGGT CGCCGTGGTC ATCGACGCCG AGCGCCGGGT CGAGGCCATC
GTGACCAAGC TCGACCTCAT CGACATCCTG GCCGCGCGGC GCGCGCCGAG CGCGTCCTGA
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| Protein sequence | MSMDQIHNSI CDAVGRTPVV RLSRFGRDLP CELLAKCEFM NPGGSVKDRI GVRMIEDAEA
AGRIKPGDTL IEPTSGNTGI GLAMAAAVKG YRVIITMPEK MSQEKQVVLE ALGAEIIRTP
TEAAWDSPES HIGVAKQLKE VIPNAHILDQ YANPSNPLAH EEGTAREILE QCGGKLDVVV
MTAGTGGTIS GVARALKAAL PTIEIVGVDP EGSILAGPGE IKSYKVEGIG YDFIPDVLDR
GLVDRWIKSN DRDSFRTARQ LIRQEGLLCG GSCGAAAWAA AKVCRERQPG ERVLVILPDS
IRNYLTKFAD EHWMRQHGFA QSEWEMGSIA DIVRCLPPRE VLSVSTSATL GDALERFRDS
GVSQMPVLDG EQALAGIVTE TDMLHHLVSG RASHDTSVVE IMERRVTTVG MHAPASELPR
IFDRGQVAVV IDAERRVEAI VTKLDLIDIL AARRAPSAS
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