| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5257 |
|---|
| Symbol | |
|---|
| ID | 8547669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 7226634 |
|---|
| End bp | 7228883 |
|---|
| Gene Length | 2250 bp |
|---|
| Protein Length | 749 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646389931 |
|---|
| Product | AAA ATPase central domain protein |
|---|
| Protein accession | YP_003269635 |
|---|
| Protein GI | 262198426 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0464] ATPases of the AAA+ class |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACGC ACAGCCAACC CGGCGCGCTC ACGCCCGAAG AGGCCCTCGC GCCGCACGTC
GCGCTGGTAC GACTGTACGC CGAAGCCGCG CTGGTCCGCC GTTTCAACGC CGGCTACGGC
TTCGCCGACG CGCGCATCCC GTCCGAGCTG TACCTGTGGA CCGAGGAGGC GCGCGAGCGC
CTCGGTCGCG ACTCGCTGCG CCCGGTCGAC ACCCATCTGC CCCAGGCCCA GGAGATCGAA
CAGGCCCTGG CCGCGGCCTA CGCCGCCCTC GACAGCAGCG AGTCGCCGCT GAGCCTGCTG
GCCGCGCGCT TTGGCCTCGA CGACGCCGAG CGCGCGCTGC TCGGCATCGC CCTGGCCTAC
GAGCTCGACC GCGATGTGCG CGAGCTGTGC CACGCGCTGG CCGGGCGGCG GGCCGGCGCG
CTGTACGCCG ACACCTGCCT CGAGCTGGCG CCCGAGCTGG GCTACACCAG CACGCTGCTG
CGCGCGCTCC ACCCCAGCGG CTCGCTGCGC CAGGGCTGCT TGATCGAGCT CGAGCCCTCG
GCCGCCGAAC CCACGCGCAC GCAGGCCAGC GGCCGCCTGG GCAGCGCCCT GTGCATCAGC
CGCGCGGCCC TCGACTGGCT GCTCGGCGAC CCGCGCATCG TGGCGCCGCT GGACGCGGCC
ATGCGCGTGC TCAGCTCGTC CGAAAACCTG CACGTGTACC TCGACGCCGC GGTGCGCACG
CAGATCGAGC GCGTGGCCAA TCACGTCCAG CGCGTCGAGC AGGCGCGCCA ACGCGGCGAG
GCCGTGGATA TGCCGCTGGT GCTGATCCAG GGGCCCAAGG GCACGGGCAA GCGCGCGGTC
GCGCACCTGC TCGCCGCCCT GCTCGGCCAG CCGCTGGTGA TCGCGCCCAT GGCCGGGGTC
CTGGCCGCGG CCCAGCGGGT GCGCGATCCG CTGCTGCCGC GCCGGGTGCT GGCGCAGGCG
CGGCTGCGCG GCGCGGCCGC CTATTTGCCC GATATCGACA TCCTCGAGGA CAGCGGCGGC
CCGCAGGGCG ATCTCGGCCT GGTGCCGGGC AGCGCGCAGG CGGCCAGCGA TCTCGCCATC
GAGGCGCTGA TGCACCACCC CGAGCTCGCC ATCCTCGCCA CCCAGGAGCA GGGCATGCCG
CGGGTGCCGG TGCCGCGACC CTTTCACCTC ATCCGCATCC CGGCCGCCAG CCTGGCCACG
CGCCAGCGCG CCTGGGAGCG CGCGCTCGGC AGCCTCAGCG ACGTCACCGA GGCCAACGCC
AGCGGCAACG CCAACCGGGC CCGGCCGCTG GGCCGCGAGG CCGAGGATCT GGCCGCGCGC
TACGTCATCG GCCCGGGCAC CATCGGCCAC GTGGTCCGCG AGGCCCGCGC CTTCGCCCGC
GCCACCGACC AGGGCGTGCA GCGCAGCCAC ATCGAGGAGG CCGTCAACCG CCGCCTCACC
CTGCGCCTGG GCTCGCTGGG CAACCGGGTC ACGCGGCGCG CGCGCATCGA GGAGATGGTG
CTGCCAGGCG ACGTGATCGA GTCGCTGTCC GACATGATCG CCATGGTCCG CGAGCGCGCC
CAGATCCTCG AGCGCTGGGG CTACGGCCGC CATCTGGGCC TGAGCCGCGG CGTCTCGGGG
CTGTTCTCGG GCGAGTCCGG CACCGGCAAG ACCATGGCCG CCAGCGTGAT CTCGAGCGCG
CTCGGTATCG ACCTGTTCCG CGTCGATCTC TCGAGCGTGA CCTCGAAGTG GGTGGGCGAG
ACCGAGAAAC ACCTGGCGCG CATCTTCGAC GAGGCCCAGC ACGCCAACGC CATGCTGCTG
TTCGACGAAG CCGACAGCCT TTTCGGCAAA CGCACCGAGC TGCGCTCGGC CCAGGACCGC
TACGCCAACC TCGAGGTCAA CTACGTGCTG CAGCGCATGG AGAGCTTCGA CGGCGTGAGC
ATCTTGACCA CCAACTTCGA GAGCGCCATC GACCCGGCCT TTTTGCGCCG CCTCAACTTC
CGCGTGCGCT TCCCCAATCC CGAGGTCGAG GAGCGCATCG AGCTGTGGCG CCGGCTGCTG
CCGCCCGAGA CCGGACTGGG CGACAACGTG GATTTCCAGC CATTGGCCCA ACGGTTCGTC
ATGACCGGCG GCCACATCCG CAACGCCATC GTGCGCGCGG CCGTGATCGC GGCCCGCGAA
GGCCGCGAGA TGCTCGAGAA AGACCTCTAC ACCGGCGCGC ATCACGAATA CACCGAGCTG
GGCAAGGTGA TGCCCTCGCT CATGGAGTAA
|
|---|
| Protein sequence | MITHSQPGAL TPEEALAPHV ALVRLYAEAA LVRRFNAGYG FADARIPSEL YLWTEEARER
LGRDSLRPVD THLPQAQEIE QALAAAYAAL DSSESPLSLL AARFGLDDAE RALLGIALAY
ELDRDVRELC HALAGRRAGA LYADTCLELA PELGYTSTLL RALHPSGSLR QGCLIELEPS
AAEPTRTQAS GRLGSALCIS RAALDWLLGD PRIVAPLDAA MRVLSSSENL HVYLDAAVRT
QIERVANHVQ RVEQARQRGE AVDMPLVLIQ GPKGTGKRAV AHLLAALLGQ PLVIAPMAGV
LAAAQRVRDP LLPRRVLAQA RLRGAAAYLP DIDILEDSGG PQGDLGLVPG SAQAASDLAI
EALMHHPELA ILATQEQGMP RVPVPRPFHL IRIPAASLAT RQRAWERALG SLSDVTEANA
SGNANRARPL GREAEDLAAR YVIGPGTIGH VVREARAFAR ATDQGVQRSH IEEAVNRRLT
LRLGSLGNRV TRRARIEEMV LPGDVIESLS DMIAMVRERA QILERWGYGR HLGLSRGVSG
LFSGESGTGK TMAASVISSA LGIDLFRVDL SSVTSKWVGE TEKHLARIFD EAQHANAMLL
FDEADSLFGK RTELRSAQDR YANLEVNYVL QRMESFDGVS ILTTNFESAI DPAFLRRLNF
RVRFPNPEVE ERIELWRRLL PPETGLGDNV DFQPLAQRFV MTGGHIRNAI VRAAVIAARE
GREMLEKDLY TGAHHEYTEL GKVMPSLME
|
|---|
| |