| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5222 |
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| Symbol | |
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| ID | 8547634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7177138 |
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| End bp | 7178841 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646389897 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_003269601 |
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| Protein GI | 262198392 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACAG GCAACGGCGC CCATGGCAAT GGCGCGAACG GCAACGGCGC CAACGACAAG
CACAGCCTGG CCCAGGTCGG CCCGGCGCCG GTGGACGGCT TGACGCCGAT CGCCGGCTTC
CCCAGCTCCG AGAAGGTCTA TCTCGAGCGC GACGGTGTGC GGGTGCCGGT GCGGCGCATC
GAGCTCAGCG GCGGCGAGCC CGCGCTCGAT GTCTACGACA CCTCGGGCCC CGAGAACTGC
GATCTCCATC GCGGCCTGCC CAAGCTGCGG CAGCCGTGGA TCGACGCGCG CATAGCCGAG
GACGACGGCA ACCGCACGCA GATGCACTAC GCGCGCCGCG GCCTCATCAC CGAGGAGATG
AAGTTCATCG CCCTGCGCGA GGGACTCGCG GCCGAGTTCG TGCGCGACGA GGTCGCCAGC
GGCCGCGCCA TCATCCCGGC CAACATCAAG CACCCGGAGA GCGAGCCGAT GATCATCGGC
AAGAACTTCC TGGTGAAGAT CAACGCCAAC ATCGGCAACT CGGCCGTGTC CTCGTCGATC
GGCGAGGAGG TCGACAAGCT GCGCTGGGCG ACAAAATGGG GCGCGGACAC CATCATGGAC
CTGTCCACCG GCAAGCAGAT CCACGAGACC CGCGAGTGGA TTCTGCGCAA CGCGCCGGTG
CCCGTGGGCA CGGTGCCCAT CTACCAGGCG CTGGAGAAGG TCGGTGGCGA CCCCGAAAAG
CTCAACATCG ACGTGTTTAT GGACACCCTG GTCGAACAAG CCGAGCAGGG CGTCGACTAC
TTCACCATCC ACGCCGGCGT GCTGCTGCGC TACGTGCCGC TCACGGCCAA TCGCGTCACC
GGCATCGTCT CGCGCGGCGG CTCCATCCTG GCCAAGTGGT GCATGGCCCA CCACCGCGAG
AACTTCCTGT ACACCGAGTT CGAGCGCATC TGCGAGCTGA TGAAGAAGTA CGACGTGGCC
TTTAGCCTGG GCGACGGCCT GCGTCCGGGC TCGATCGCCG ACGCCAACGA CGCCGCCCAG
CTCGGCGAAC TCGAGACCCT GGGCGAGCTC ACCGAGCTGG CCTGGAAGCA CGACGTGCAG
GTGATGATCG AGGGCCCCGG CCACGTGCCC ATGCACAAGA TCAAAGAGAA CGTCGAGCTG
CAAGAGAAGC TGTGCCACGA GGCGCCCTTC TACACCCTGG GGCCGCTCAC CACCGATATC
GCTCCCGGCT ACGATCACAT CACCTCGGCC ATCGGCGCGG CCATGATCGG TTGGTTCGGC
ACCGCCATGC TGTGCTACGT GACGCCCAAG GAGCACCTCG GCCTGCCCGA TCGCGACGAC
GTCAAAGCCG GCGTCATCGC GTACAAGATC GCGGCCCACG CCGCCGACCT GGCCAAGGGC
CACCCGGGCG CACAGAAGCG CGACGACGCG CTGTCCAAAG CGCGCTTCGA GTTCCGCTGG
GACGACCAGT TCAACCTCTC GCTCGACCCC GACACCGCGC GCGCCTTCCA CGACCAGACC
CTGCCAGCGC CCGCGGCCAA AGGCGCGCAC TTCTGCTCCA TGTGCGGCCC CAAGTTCTGC
TCGATGAAGA TCACCCAGGA CGTGCGCGAC TTCGCCGTCG CCCAGGGCGT GAGCGAGGAC
GAGGCCGTGC GCTCCGGCAT GGAGCACAAA GCCGCCGAGT TCCGCGAGCA GGGCAAGCGC
CTGTACGCGG AAACCGAGAG CTGA
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| Protein sequence | MSTGNGAHGN GANGNGANDK HSLAQVGPAP VDGLTPIAGF PSSEKVYLER DGVRVPVRRI
ELSGGEPALD VYDTSGPENC DLHRGLPKLR QPWIDARIAE DDGNRTQMHY ARRGLITEEM
KFIALREGLA AEFVRDEVAS GRAIIPANIK HPESEPMIIG KNFLVKINAN IGNSAVSSSI
GEEVDKLRWA TKWGADTIMD LSTGKQIHET REWILRNAPV PVGTVPIYQA LEKVGGDPEK
LNIDVFMDTL VEQAEQGVDY FTIHAGVLLR YVPLTANRVT GIVSRGGSIL AKWCMAHHRE
NFLYTEFERI CELMKKYDVA FSLGDGLRPG SIADANDAAQ LGELETLGEL TELAWKHDVQ
VMIEGPGHVP MHKIKENVEL QEKLCHEAPF YTLGPLTTDI APGYDHITSA IGAAMIGWFG
TAMLCYVTPK EHLGLPDRDD VKAGVIAYKI AAHAADLAKG HPGAQKRDDA LSKARFEFRW
DDQFNLSLDP DTARAFHDQT LPAPAAKGAH FCSMCGPKFC SMKITQDVRD FAVAQGVSED
EAVRSGMEHK AAEFREQGKR LYAETES
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