Gene Hoch_5175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5175 
Symbol 
ID8547587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7125915 
End bp7126334 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content67% 
IMG OID646389852 
Productthioesterase superfamily protein 
Protein accessionYP_003269556 
Protein GI262198347 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.641217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCGT CCTTTCCCGT CCGCATCGAG CTGCCCATCA CCTGGGGCCA GATGGACGCC 
TTCGGCCACG TCAACAACAC CGTGTATTTC CGTATGTTCG AAGAGGCTCG CATCCAGCTC
TTCCGCGAGG TCGGCATCGC TACCCGCACG CCCAACGGCG GCTTCTCGGC CATCCTCGCG
GCCACGCAGT GCCAGTTTCG CCGGCCCATG GAGTACCCCG ATACCGCGCG GGTGGAGACC
GGCGTCTCGC GCATCGGCTC GAGCAGCTTC ACCCTGCTCT ACCGCGTGCA CAGCGAGGCC
CAGGCGCAGC TCGCCGCCGA GGGCGACAGC GTGGTGGTCT GGTACGACTA CGCCGCCGCC
AAGAGCGCGC CGCTGCCCGA CCCACTGCGT CAGCAGCTCG AGCGTTTGCA GGTGTCCTGA
 
Protein sequence
MSPSFPVRIE LPITWGQMDA FGHVNNTVYF RMFEEARIQL FREVGIATRT PNGGFSAILA 
ATQCQFRRPM EYPDTARVET GVSRIGSSSF TLLYRVHSEA QAQLAAEGDS VVVWYDYAAA
KSAPLPDPLR QQLERLQVS