Gene Hoch_5119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5119 
Symbol 
ID8547530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7055546 
End bp7057819 
Gene Length2274 bp 
Protein Length757 aa 
Translation table11 
GC content69% 
IMG OID646389795 
Productnitrite and sulphite reductase 4Fe-4S region 
Protein accessionYP_003269500 
Protein GI262198291 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0155] Sulfite reductase, beta subunit (hemoprotein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.257814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.684028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CGCGTACCTG GAAAGACGAG CTGGACGGGC AGATGCCCGA GGAGCTGGCT 
CGCGAGATCG ACATCTTCGA GACCCAGATT GAGCTGCGCA AGCAGGGCAA GATGGACGAG
AAGCTCTTCG CCGAGACGCG CCTGCGACGC GGTGTCTATG GCCAGCGCTA CGACAACGGT
CAGCGCCACG ACGGCGTGGC CACGCGGCCC CTGGACTTCC CCTGCGGCGA CCTGACCAAG
GGCCCGGAGA CGGTCTGGGA TGCGCCCGGG ATGATGCGCA TCAAGATCCC GATGGGCGTG
CTCAGCGCGG CCCAGATCGA CGTGCTGGCC GAGACCGCCG AGGAGTACTC GGACAGCATC
CTGCACGTGA CCACGCGCCA GGATATCCAG CTCCACTTCG TGCACATCGA GGATACGCCC
GCGATGATGC GCCGCCTGGC CGCGGTCGGC ATCACCACCC GCGAGGCCTG CGGCAACTCG
GTGCGCAACG TCACCGCCTG CCAGTTCGCG GGCGTGTGCA ACGACCAGAG CTTCGACGTC
ACGCCGTACG CGCACGCGCT CACCTACTAT TTCCTGGGCC ACCGCGACGT GCAGGATTTC
GGACGCAAGT TCAAAATCGC CTTCTCCGGC TGCCACGAGC ACGCCTGCGG TCTGGCCTAT
ATCCACGACA TCGGCGCGGT GGCGGTCAAG CGCCAGGTCG GCGACAAGCA GCAGCGCGGC
TTCACGCTGT ACGTCGGCGG CGGCCTGGGC TCGGTGCCGC ATCAGGCCAA GGTGCTCGAG
GAGTTCGTCT CCGAAGAGGA GCTTCTGCCG CTGTGCCAGG CGGTGTGCCG GGTGTTCTCG
CGCCTCGGCG AGCGCAAGAA CCGCAACCGC GCGCGGCTCA AGTTCGTGGT CGCCAAGCTC
GGCATCGAGG AGTTCCGCAA GGTCGTGCGC GAGGAGCGCG ACGGCATCCC GCACGACGAG
CGCTGGACCA CCTACCTGGG CGATCTCGGC GTCACCGAGG AGAAGCCGCT CAAGCCCGGG
CGCGCGCTCG AGGGCGAGAT CTTCCCCAAG GGCTTCCGGC CGTGGCGCGA GACCAACGTG
CGCCCGCAGG CCCAGGACGG CTACGTGGTC GCCACCGTGC GCCTGCCGCT CGGCGACTTC
ACCTCGGACC AGGCCCGCTA CCTGGCCGAC ATGGCCCGCC GCTACACGGG CGACACCGTG
CGCCTCACGG TCGAGCAGAA CCTGGTGTTC CGCTGGCTGC CCGAGGCCGA CCTGCCCGCC
TTCTACAAGG ACCTGAGCGC GGTCGGCCTG GCCGAGGCCG GCGCCGGGAC CATCAGCGAC
ATCACCGCCT GCCCCGGCAC CGACACCTGC AAGCTCGGCA TCTCGGCCTC GCGCGGGCTC
GCCGGTGAGC TCGAGGAGCG GCTCGCCGAC AAGCTCGAGG AGCTGCCCGC GGCCGCGCGC
GCGCTGCGCA TCAAGACCAG CGGCTGCTTC AACTCCTGCG GCCAGCACCA CATCGCCGAC
ATCGGCTTCC TGGGCGTGAG CCGCAACGTC GGCGGCCGCC GCGTGGCCCA CTTCCAGCTC
GTGGTCGGCG GCAAGTGGCG CGAGAACGGC GGCGCCTACG GCCTGGCCAT CGGCGCCTTC
CCGGCCAAGC GCGTGCCGCA GGTGATCGAC CGCCTGGTCG AATTCTGGAC CGCGGAGCGC
GACGGCGAGG AGAGCTTGCA GGATTTCATC CAGCGCACCG GCCGCGCCAA GCTCAAGCAG
GCCCTCGACG ATCTGCGCGC GGTGCCCGCG TACGAGGACG ATCCCTCGTT CTACGTCGAT
TGGGGTGACG ACCGCGAATA CACCATCGGC GACATCGGCG TCGGCGAGTG CGCGGGCGAG
GTGGTGAGCT TCACCGACTT CGGCCTGGCC GACAGCGAGC GCGAGGTCTT CGAGGCCCAG
GTGGCGCTCG ACGAGGGCGA CGCCGCGCGC GCCACCGAGC GCGCCTTCAG CGCCATGCTC
CAGGCCGCCA AGGCCCTCAT CCGCACCCAG CACATCGACG TCACCGAGGA CGCCGACACC
CTGGTCGGCG AGTTCCGCAC TCGCTTCCAC GACACCAAGC TGTTTCACGA CAAGTATGCG
GGCGCCAAGT TCGCGCAGTT CTTCTTCCGC ATGTACGAAC AGCACAAGGA CGGCAGCGGC
GCCGCCAGCG ACGCCGAGCA CGCCCACCAG AACATCGAAG AGGCCCAGCT CTTCATCGAA
GCCGCGCACG CTTGCTACGA CCGTCTGCAA GAGAGCGCGC AGGCGCTGCC GTAG
 
Protein sequence
MSTTRTWKDE LDGQMPEELA REIDIFETQI ELRKQGKMDE KLFAETRLRR GVYGQRYDNG 
QRHDGVATRP LDFPCGDLTK GPETVWDAPG MMRIKIPMGV LSAAQIDVLA ETAEEYSDSI
LHVTTRQDIQ LHFVHIEDTP AMMRRLAAVG ITTREACGNS VRNVTACQFA GVCNDQSFDV
TPYAHALTYY FLGHRDVQDF GRKFKIAFSG CHEHACGLAY IHDIGAVAVK RQVGDKQQRG
FTLYVGGGLG SVPHQAKVLE EFVSEEELLP LCQAVCRVFS RLGERKNRNR ARLKFVVAKL
GIEEFRKVVR EERDGIPHDE RWTTYLGDLG VTEEKPLKPG RALEGEIFPK GFRPWRETNV
RPQAQDGYVV ATVRLPLGDF TSDQARYLAD MARRYTGDTV RLTVEQNLVF RWLPEADLPA
FYKDLSAVGL AEAGAGTISD ITACPGTDTC KLGISASRGL AGELEERLAD KLEELPAAAR
ALRIKTSGCF NSCGQHHIAD IGFLGVSRNV GGRRVAHFQL VVGGKWRENG GAYGLAIGAF
PAKRVPQVID RLVEFWTAER DGEESLQDFI QRTGRAKLKQ ALDDLRAVPA YEDDPSFYVD
WGDDREYTIG DIGVGECAGE VVSFTDFGLA DSEREVFEAQ VALDEGDAAR ATERAFSAML
QAAKALIRTQ HIDVTEDADT LVGEFRTRFH DTKLFHDKYA GAKFAQFFFR MYEQHKDGSG
AASDAEHAHQ NIEEAQLFIE AAHACYDRLQ ESAQALP