Gene Hoch_5113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5113 
Symbol 
ID8547524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7046133 
End bp7047524 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content72% 
IMG OID646389789 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003269494 
Protein GI262198285 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCGG GCTCCATGTC CCTGCTGCGT CGCTGGCGTT CGTCGCTGGC GGTCTACCGC 
GACCGCCGCA TGCTGGTGCT GTTGCTGCTG GGGTTCTCCA GCGGCCTGCC CCTGCTGCTG
GTGTTCGGCA CGCTGAGCGT GTGGCTCAAG GACATCGGCC TGAGCGTGGG CGCCATCGGC
CTGTTCGCGG CCGCGCGCAC GCCCTACTCG GTCAAGTTCC TGTGGGCGCC GCTCATCGAC
AGCCTGCCGC TGCCCGTGCT CACGCGCTGG CTCGGGCGCC GGCGCGCGTG GATGCTGGCC
ACCCAGCTCG GCCTGGCCGC GGCCCTGGCC GCCCTGGCCC TGTCGCAGCC CGATCAGGAG
CCGCTGCTGG CCGCGATCCT GGCGGTGCTG GTGGCCGTGC TCTCGGCCAG TCAGGACATC
GTCATCGACG CCTACCGCAT CGACCGCCTG GCCGTGGACG AACAGGGCGC GGGCGCCGCG
GTCGCGGTCA TGGGCTATCG CGTGGGCATG CTGGTGGCCA GCGCCGGCGC CTTCTACCTG
GTCGGCTTCG GCGTGAGCTG GCCGCTCACC TATCTGATCA TGGCCGCGCT CATGGGCGTC
GGCGTGGCCA CCACCCTGGC CTGCCGCGAA CCCGAGGCCA CCGGCGGGCT GCCGGCGATC
ACGCGCGATG GCTCCAGCGT GCTGGCCCAG ATGCGCCGCA GCGTGGTCGC GCCGCTGGCC
GATTTTGCCC GCCGCCGCGG CTTCGTGCTG CTGCTCTGCT TCGTGCTGCT GTTCAAGCTC
GGCGACGCCC TGGCCGGCAC CATGACCAAC GTGTTCCTGG TCGATATCGG CTTTACCAAG
CTCGACATCG CCAACATCGC CAAGACCTAC GGCCTGGTGG CCACCATCCT CGGCGTGGTG
CTCGGCGGCT GGCTGGTGCG CGCGCTGGGC ATGGTGCGCG CGCTGTGGGT GGCCGGCCTG
GTGCAGATGG CGTCCAACCT GATGTTCTCG CTGCAGGCCT GGGCGGGCGC GGACACCTGG
CTGCTGGTGG CCACCATCGG CATCGAGAAC ATCTCGGGCG GCGTCGGCAC CGCCGCCTTC
GTCGCCTACC TCAGCGGCCT GTGCAGCAAA GCCTACAGCG CCACGCAGTA CGCGCTCCTC
TCAGCGCTCG CCGGCGCCAT CCGCAACCTG CTGTCGACGG TCACCGGCTA CGTGGCCGAG
GCCGTGGGCT GGTTCGATTA CTTCCTGCTC ACCGCGCTCG CGGCCGCCCC CGGCCTGCTG
CTGCTGTACG TGATCGGACG CTCGGACTGG TTTGCCAGCC CGCCCGAGGC TCAGGCCGCC
GACGCCGACG CAGGCGCCGA CGCAGGCGCC GCTGCCGACC GGGGCGCCGG TAGCGACGCC
GCGCGCTCGT AG
 
Protein sequence
MMPGSMSLLR RWRSSLAVYR DRRMLVLLLL GFSSGLPLLL VFGTLSVWLK DIGLSVGAIG 
LFAAARTPYS VKFLWAPLID SLPLPVLTRW LGRRRAWMLA TQLGLAAALA ALALSQPDQE
PLLAAILAVL VAVLSASQDI VIDAYRIDRL AVDEQGAGAA VAVMGYRVGM LVASAGAFYL
VGFGVSWPLT YLIMAALMGV GVATTLACRE PEATGGLPAI TRDGSSVLAQ MRRSVVAPLA
DFARRRGFVL LLCFVLLFKL GDALAGTMTN VFLVDIGFTK LDIANIAKTY GLVATILGVV
LGGWLVRALG MVRALWVAGL VQMASNLMFS LQAWAGADTW LLVATIGIEN ISGGVGTAAF
VAYLSGLCSK AYSATQYALL SALAGAIRNL LSTVTGYVAE AVGWFDYFLL TALAAAPGLL
LLYVIGRSDW FASPPEAQAA DADAGADAGA AADRGAGSDA ARS