| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5108 |
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| Symbol | |
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| ID | 8547519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7039817 |
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| End bp | 7041871 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646389784 |
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| Product | transcriptional regulator, NifA subfamily, Fis Family |
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| Protein accession | YP_003269489 |
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| Protein GI | 262198280 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCATTCC GCATCACCCG GGATTTCCGC TATAGTGAGC GGCGTCTCGC ACCGGTCTCG
GCCGCTCTTC TCTCACCACG CAACACACAG CACTTGCTCA CCCTGGAAGT CGTCGAAGGC
ACTGCCCGCG GGCAAGTATT CGAGTGCCCC GAAGCCATCA TCTCGCTGGG ACGCGCTGAC
GACAACCGCG TCGCGCTGTC CGATTACCAC CTGTCCGGCG AGCACGCGCA GATCTTCGTC
GAAGGCGATC TGTACATCTT CCGCGACCTG CGCTCGACCA ACGGCTCGCG CGTGCTGCGC
GGCAACGAGC TGATTCCGGT CGACGCGCGC ACCGACTGGG AGATCACCCT GCACGACGGC
GATCACCTGT GTCTGGGCGA TCCCGCCGCG CCGGTCACCG TGCTCGTGTA CCTGCCCGAG
CACGCGCGCT CGGCCGCCAG CGAGCTCGGC GATCGCCTCA TCGCCTCGCG CTCGATCGTC
GATCTGCCCG CGGTCACCCA CCGCGTCGAG CACGACCCGG CCAGCGCGCT GCGCCTGTAC
AAAGCGCTGC AGCCGCTGAG CGCGCGCCTC GATCTCAGCG CCACCATCGA CGCCGTGGTG
TGCGCCACCT TCGAGCTGCT GCCGCAGGTG ACCAACGTGG CCGTGCTGAT GCGCTCCGAG
GTCGACAAGG ACCGCTTCAC CGTGGCCGTA TCGCAGACCC GCGACGGCAG CGGCCATGGT
GAGGCCCGGG GCGAGAGCCG CGGCGACGGT CGGCCCGCCG AGGTCCGCGC CAGCCGCTCG
GTGCTGCGCC GCGTGCTGTC CGAGCGCGCC GCCGTGATCA CGGCCAACGC GCAGGAGGAG
CTGGCCAGCT CGGAGTCGAT CCTCGGCGGC AAGATCCTGT CGATGGTGGC CGTGCCGCTG
TGGCGCGGCG ACGAGATCAC GGGCCTCATC CAGGCCGACA ACCGCGCCAG CGCCGGCATG
CTCAGCGAGC GCGACCTCGA GGTGGCGCTG CTGCTCGGCG CCCAGGCCGC GCTGGCCATC
GACAACGCCG CCCTGGTGTC GCGGCTCAAA GTCGCCGAGG AGCGGCTGCG CGGTGAGAAC
ACCTATCTCA AGCGCCGCGA GGAGAACCTG CGCTTCGAGA ACATCATCGG CGAATCCTCG
GCCATGCAGG CGATCTTCGA CCAGCTCCGC AAAGTGGTCG ATACCCGCGC CACCGTGTGC
ATCGAGGGCG AGACCGGCAC CGGCAAAGAG CTGATCGCCA CCGCCATCCA CTACGAATCC
AACCGCCGCG ACAAGATGTT CGTGGCCCAG AACTGCGCCG CGCTGCCCGA GAACCTGCTC
GAGTCCGAGC TCTTCGGCCA CAAGAAGGGC GCCTTCACCA GCGCCGACAC CGACAAAAAA
GGCCTGTTCG AGATCGCCGA CGGCGGCACC TTGTTCCTCG ACGAGATCGG CGAGATGCCG
CTGTCGCTGC AGGCCAAAGT GCTGCGCGTG TTGCAGGAGG GCACCATCCG GCCGCTGGGC
AGCACGCGCG AGCGCCAGGT CGACGCCCGC ATCATCTGTG CCACCAACCG CGATCTCGCC
GCCGAGGTCG AAAAAGGCAG CTTCCGCCAG GATCTCTACT ATCGCCTGGT GGTGTTTCCC
ATTCGCCTGC CGCCGCTGCG CGAGCGCCGC GAGGACATCC CGCCACTGTG CGAGCACTTC
CTCAAGCGCT ACAGCCGCGA GTTCCGCCAG GAGGTGCTCG GCTTCTCGCA AGAATGCCTC
GACGTGATGA GCACCTACCA GTGGCCGGGC AACATCCGCG AGCTCGAGAA CGAGGTCCAG
CGCCTGGTTA TCCAGACCGA CGCGGGCTCG TGGATCGAGG TCTCGGAGCT GTCGCCGCGG
CTGCGCAAGG TCGAGGGCAC CCTGGCCCGC ATCGCGCCCA AGAAGGGCAC GCTCAAGGCG
ATGATGGAGC AGGTCGAGCG CTGGCTTTTG GCCGAGGCGC TGCGCGAGCA CGACAACAAC
AAGACCCGCA CGGCCCAGTC GCTGGGCATC ACGCGCGAAG GTCTGCACAA GAAGCTGTCC
AAGTACAGCA TGTAG
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| Protein sequence | MPFRITRDFR YSERRLAPVS AALLSPRNTQ HLLTLEVVEG TARGQVFECP EAIISLGRAD
DNRVALSDYH LSGEHAQIFV EGDLYIFRDL RSTNGSRVLR GNELIPVDAR TDWEITLHDG
DHLCLGDPAA PVTVLVYLPE HARSAASELG DRLIASRSIV DLPAVTHRVE HDPASALRLY
KALQPLSARL DLSATIDAVV CATFELLPQV TNVAVLMRSE VDKDRFTVAV SQTRDGSGHG
EARGESRGDG RPAEVRASRS VLRRVLSERA AVITANAQEE LASSESILGG KILSMVAVPL
WRGDEITGLI QADNRASAGM LSERDLEVAL LLGAQAALAI DNAALVSRLK VAEERLRGEN
TYLKRREENL RFENIIGESS AMQAIFDQLR KVVDTRATVC IEGETGTGKE LIATAIHYES
NRRDKMFVAQ NCAALPENLL ESELFGHKKG AFTSADTDKK GLFEIADGGT LFLDEIGEMP
LSLQAKVLRV LQEGTIRPLG STRERQVDAR IICATNRDLA AEVEKGSFRQ DLYYRLVVFP
IRLPPLRERR EDIPPLCEHF LKRYSREFRQ EVLGFSQECL DVMSTYQWPG NIRELENEVQ
RLVIQTDAGS WIEVSELSPR LRKVEGTLAR IAPKKGTLKA MMEQVERWLL AEALREHDNN
KTRTAQSLGI TREGLHKKLS KYSM
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