Gene Hoch_5070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5070 
Symbol 
ID8547481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp6990879 
End bp6991652 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content71% 
IMG OID646389746 
Productglycosyl transferase family 2 
Protein accessionYP_003269451 
Protein GI262198242 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.46394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGAC AGCTTTCGGT CGCCGTGGTC ATGCCGGCGT ACAATGAGGA AGGGGCCATT 
GGTCGAGCCG TGGCCTCGAT GCCGGCGCTT GTCGATCACC TCATCGTGGT CGACGACGCC
TCTGCCGACG CCACGGCCGA GCGCGCGGCG CAGGCGGCGG TGGGCTCGTG TGAGGTGCTG
CGCCACGAGC GCAATCGCGG CGTCGGCGCC GCCATCGTCA CCGGCTACCG GCGCGCGCTG
GAGCTGGGCT TCGACGCGGT GGTGGTGATG GCCGGCGACG GCCAGATGGA CCCGGCCGAT
CTGCCCGCGC TGGTGGCGCC GGTGGCCGCG GGCGAGGCCG ACTACGCCAA GGGCAATCGC
TTTCGCCACC CGGACGTGTG GAAGGTGATG CCGCGGGCGC GCCTCCTGGG TAACATCGCG
CTGTCGCTGG TGACCAAGCT GACCGCCGGC TATCTGCACG TCTTCGACTC GCAGTGTGGT
TACACGGCCA TCCATCGCCA CGCGCTCACG CGCATCGAGC TCGACCGGGT GTTCGCGCGC
TACGGCTATC CCAACGATCT GCTGGCGCGG CTGCACAGCG CCGGCATGCG CGTGGTCGAC
GTGGCCGTGC GCCCGGTCTA CGGCCCGCAG TGGAAGAGCG GCATCCGGCC GCACATGGTC
GTGTATCCGG TGTCCTTTGT GCTGGCGCGC TCGCTGGTCC GCCGCCTGGT GGTGGAGACC
CGCGCGCGTC TCGCCCTGGC GCTGGTGCAG GCCCGCGAGC CCAAGCTGGG CTGA
 
Protein sequence
MFRQLSVAVV MPAYNEEGAI GRAVASMPAL VDHLIVVDDA SADATAERAA QAAVGSCEVL 
RHERNRGVGA AIVTGYRRAL ELGFDAVVVM AGDGQMDPAD LPALVAPVAA GEADYAKGNR
FRHPDVWKVM PRARLLGNIA LSLVTKLTAG YLHVFDSQCG YTAIHRHALT RIELDRVFAR
YGYPNDLLAR LHSAGMRVVD VAVRPVYGPQ WKSGIRPHMV VYPVSFVLAR SLVRRLVVET
RARLALALVQ AREPKLG