Gene Hoch_4975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_4975 
Symbol 
ID8547383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp6858829 
End bp6860571 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content71% 
IMG OID646389649 
Productserine/threonine protein kinase 
Protein accessionYP_003269357 
Protein GI262198148 
COG category[K] Transcription
[R] General function prediction only
[T] Signal transduction mechanisms
[L] Replication, recombination and repair 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.519124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.302776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGTG ACCGCTGCGG CCACGTGAGC CGGAGCCAGG CGCGCTTTTG CAGCGCGTGT 
GGCGGCGAGC TGGCGATCAA CCTCGTCGGC GAGGAGCTGG GCGGCCGCTA CCGCGTGCTC
AGCTTCATCG GCAGCGGCGG TATGGGCCGG GTGTACCGCG CCGAGCACAT GCTGCTCGAG
AAGCCCGTGG CCATCAAAGT GCTGGCGCCC GAGTACGCGC GCGACGAGAC CATGTGGCGG
CGCTTCCGCC GCGAGGCCTT TGCCGCCGGC CGCGTCGCCC ATCCGCACAT CGCGGCCACG
CTGGACTTCG CCTACGAGGC CAACCTGGTC TACTCGGTGA TGGAGTACGT CGACGGCATC
CCGCTCGACA CGGTCATCGG CCACAAACCC ATGCCGACCG ATCGCGCCCT GAGCATCGCC
CAGCAGATCG CCCAGGCGCT GGGCGCCGCG CACGAGGCCG GCGTGATCCA CCGCGACGTC
AAGCCCGGCA ACGTGATCGT GAGCGAGGTC GGCCGCAAGG ACTTCGTCAA GGTGGTGGAT
TTCGGCCTGG CGGTGCTGCG CTCGGGTCTC GGCAAGGCGC GCACCACCCA GGGCGGCGTG
ACCATGGGGA CGCCGGCCTA CGTGGCCCCC GAGCTGGTGC TGGGCGAGCC TCTCGACGCG
CGCACCGATG TCTACGCGCT GGGCGCCGTG CTCTACGAGA TGCTGGTGGG CGAGCCGCCC
TTTGGCCACG GCGACCCGGC GCAGCTCTCG GTCAGCCACG CCTACAAAGA TCCGACGCCG
CCGAGCATGC GGGTGAGCGA GCGCTTGCCC GACCCGGTGG ACGCGCTGGT GATGAGCATG
CTGGCCAAGC ACCCGGACGC GCGTCCGGCC GATGGCAACG CGGTGGCCGA GGCGCTGAGC
GCGCTCATCG GGCCGCTGTC CAATCCGGTC GCCATGTCGC TGCAGCAGGA CTGCGCGGTG
CTGGTGGTGC GCTTCGGCGA TCTCGAGGCC GCGGTGGATC AGGCCCGCTC CGAGGTCAAG
CGCGCGGTCC AGGAGGGCGA GGGCATGGTC GCGCGCGTGC CCGGCGACGA GATGATCACC
CACTTCTCGG ACGCGCGCTC GGCGCTGAAG GCGGCGGCCC GGCTGCGCGA GCTGTCGATG
CGCTGGCCCA TGGCCGTGGC CGTGCACTAC GGCTCGGTCG AGCTCAGCGT CGGCGGCGCG
GTGTTCGGCC AGACGGTCAA CGTGGCCATG CGCATGGTAC GTCTGGCCGA GATCGGTGAG
GCGCTGGCCA CCGGCGAGGT GCGCGCCGCG CTCGACCCGC CGCCGAGCGG CGTCATCGGC
ACGCACATGC GCCTGGTCGA TCGCTCGGTC GATGTGTTCC CGGTCTCCGA CCTGGTGTCC
GACGACGTGC CGGTGATTCC CGGTCTCATC CGCGAGCGCA GCGCGGTGTC GTTTACCTGC
CTGTGCGGCT CCGAGGGCGT CATCGTCACC GGCCGGCTGC GCGAGGGCGA GCCCATCCGG
GCCCGCTGTC GGGGTTGCAA CCGGCCGCTG TCGGTGCTGC CCTACGCCGA TGACGTGGTC
GGCGGCGGGC TTTGGGACAC GCGTCCCGAT CTGCCGGCGC GCGAGCTTCA GGGCGACCGC
GCCGACACCG TGCAGTCGCC GGTGTTGTCC TACGAGATGG GCGAAGACGA TATGCCCACC
GAGGACGAGC TGAACTCGCC CGTGGACGAG GGCGCGCGCC ACCGGATCTC GGAGAACGAG
TAG
 
Protein sequence
MKCDRCGHVS RSQARFCSAC GGELAINLVG EELGGRYRVL SFIGSGGMGR VYRAEHMLLE 
KPVAIKVLAP EYARDETMWR RFRREAFAAG RVAHPHIAAT LDFAYEANLV YSVMEYVDGI
PLDTVIGHKP MPTDRALSIA QQIAQALGAA HEAGVIHRDV KPGNVIVSEV GRKDFVKVVD
FGLAVLRSGL GKARTTQGGV TMGTPAYVAP ELVLGEPLDA RTDVYALGAV LYEMLVGEPP
FGHGDPAQLS VSHAYKDPTP PSMRVSERLP DPVDALVMSM LAKHPDARPA DGNAVAEALS
ALIGPLSNPV AMSLQQDCAV LVVRFGDLEA AVDQARSEVK RAVQEGEGMV ARVPGDEMIT
HFSDARSALK AAARLRELSM RWPMAVAVHY GSVELSVGGA VFGQTVNVAM RMVRLAEIGE
ALATGEVRAA LDPPPSGVIG THMRLVDRSV DVFPVSDLVS DDVPVIPGLI RERSAVSFTC
LCGSEGVIVT GRLREGEPIR ARCRGCNRPL SVLPYADDVV GGGLWDTRPD LPARELQGDR
ADTVQSPVLS YEMGEDDMPT EDELNSPVDE GARHRISENE