| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4972 |
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| Symbol | |
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| ID | 8547380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 6854727 |
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| End bp | 6855680 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 646389646 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003269354 |
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| Protein GI | 262198145 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.377224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAGA TCGTAGATCA TGAGCAGGTG CGCGCAGACA TCGTCGCGCG CGCGGTACAG
TTGTTCGCCG AACAGGGTTT CGGTGGACTG GGAATTCGCG GTCTGGCCAA AGCGGTCGGA
ATGGCCAAGA GTTCCATCTA TTACTACTAC CAGACCAAAG AGGCGCTCAT CGATGCGGTC
ATCGAAGCCG TGGTTACGCC CGACCTGCTG AGCCTCGAGG CCGAGGTCCA GGGCGCCGGT
AGCCTCGACA AGCGACTCGA CCGCGCCGCC TCGTGGATCG CCAAGAACGA GGAGCGCTTC
GCGGTGCAGA TCCGCATTCT CAGCGAAGCC GCTCGCGAGG AGAAGTGGAA CGACGACGGC
CGCGTCACCC AGCCCTACGT CAAGGGCCTC TCGAGTGTGC TCGGTCTCAA CACCGGCGCC
GCGCGCTCCT TCTACCTGCA CATCCTCGGC GTGGTGTTGC AGCGTATGGT CGACGGCAAG
CGCACCTCGC TCAAGCGCGA GCTGAGCACC TTCAACGACC TCCTGGTGAA GTCGAAGTCC
TCGGTAGAGA CCAAGGTCAA GGCGCTGCCC GCGGCCGCGA AGTCGACCAC CCAGGCGGCG
CCCGCGGCCG AGGCCGCGCC CAAGACCGCC AAGAAGACCT CGCGCAAGGC CGCCAAGAAG
ACCTCGCGCA AGGCCGCCAA GAAGACCCGC TCCAAGACCG CGAGCGCGAC CGCGGCGCGC
AAGAAGTCGG CCACCAAGAA GTCGGCCACC AAGAAGGCGG CCACCAAGAA GGCGGCCACC
AAGAAAGCGG CTACGAAAAA GGCGGCCACC AAGAAGGCGG CTACCAAGAA AGCGGCCAAG
AAGAAGACCA CGCGCGCGGC CAAGACCAGC ACGCGCAAGG CGGCCACCGC CTCGGCTTCG
AAGACCCGCA CCAAGGCCAA GAAGAAGGCC TCGAAGCGCC GCAGCAAGAA GTAG
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| Protein sequence | MPKIVDHEQV RADIVARAVQ LFAEQGFGGL GIRGLAKAVG MAKSSIYYYY QTKEALIDAV
IEAVVTPDLL SLEAEVQGAG SLDKRLDRAA SWIAKNEERF AVQIRILSEA AREEKWNDDG
RVTQPYVKGL SSVLGLNTGA ARSFYLHILG VVLQRMVDGK RTSLKRELST FNDLLVKSKS
SVETKVKALP AAAKSTTQAA PAAEAAPKTA KKTSRKAAKK TSRKAAKKTR SKTASATAAR
KKSATKKSAT KKAATKKAAT KKAATKKAAT KKAATKKAAK KKTTRAAKTS TRKAATASAS
KTRTKAKKKA SKRRSKK
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