| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4953 |
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| Symbol | |
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| ID | 8547361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 6827807 |
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| End bp | 6828916 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646389627 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_003269335 |
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| Protein GI | 262198126 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGAAC GCATCGAGCT CGCGCCCCTG GTGGTCGACG CGAGCACCGA CATGGGCACG
CGCAGCCACC TCGACGCCGC CGGCGAGCCG CGCATCATCG TGCGCCGCTT CGTGGTCGAC
GAGGACTCGG CCGGCTTTCG CCTCGACCAC TACCTCAAGC GGCAGATCCC GCGGCTGTCG
CGCACCAAGC TGCAGGACGT CATCCGCCAT CAGCTCGAAC CAGTGCGCGG GCGCCAGCTC
AAGCCCAGCG CCAGCGTGCA CAGCGGCGAC GTCATCGTCA TGAGCCGCCG CGCCCGGCCC
GAGCCGCCGT GCCCGCGCAC CATCGGCGTG CTGTACAGCG ATCCGCACAT GCTGGTCATC
GACAAACCGG CCGGGCTGCC GGTGCACGCC TCGGCGCGCT TCTACTTCAA CACCCTCACC
CGCGTGCTCG GCGAGCGCTT TCCCGGCCAG CCCATGCAGA TCTGCCATCG CCTCGACCGC
GAGACCTCGG GCGCGCTGGT GGTCGCCCGC GGCAAACCCG AGGCCGCGCG GCTCAAGGGC
GCGTTCGCCG ACAAGCGGGC GCACAAGACC TATCTCGCGC TGGTCTGGGG CGATCCCCCG
TGGCCCGACG GCGCCTGGGA CAGCGCGCCC GAGGACGACG CGATCATCGA CTTGCCGCTG
GGTCTGGTCG CGGACGAGAG CGCGCGCATC AAGATCCGCA TGGAGGTGCG CGCCGGCGCC
CTGCCCTCGC TCACCCGGGT GCGCGTGCTC GAGCGCCGCG GCCGCGCCGC CCTGGTGCGC
TGTCTGCCGC TGACCGGACG CCAGCACCAG ATCCGCGCGC ATCTGGCCGC GTGCGGCCAT
CCCATCGTCG GCGACAAGCT CTACGCCCAC GGCGACGATG TCTTTGCCGC CTACTGCGAC
CGCGGCATGA CCCCCGAGCT CTTGGAGCGC GTGCGCCTGC CGCGCCAGGC GCTGCACGCG
GCCGCGATCG CGCTGCCGCA CCCATTCGAG GGCCGTCAGG TGCGCGCCGA GAGCCCGCTG
CCCGCCGATA TGCGCGCGTT TCTCGACCGC GCGGACGCCG AAAGCATGCC GGCGCTGTGC
GCGCGCGCGA GCGGCGCGGA GCTGTGCTAA
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| Protein sequence | MAERIELAPL VVDASTDMGT RSHLDAAGEP RIIVRRFVVD EDSAGFRLDH YLKRQIPRLS
RTKLQDVIRH QLEPVRGRQL KPSASVHSGD VIVMSRRARP EPPCPRTIGV LYSDPHMLVI
DKPAGLPVHA SARFYFNTLT RVLGERFPGQ PMQICHRLDR ETSGALVVAR GKPEAARLKG
AFADKRAHKT YLALVWGDPP WPDGAWDSAP EDDAIIDLPL GLVADESARI KIRMEVRAGA
LPSLTRVRVL ERRGRAALVR CLPLTGRQHQ IRAHLAACGH PIVGDKLYAH GDDVFAAYCD
RGMTPELLER VRLPRQALHA AAIALPHPFE GRQVRAESPL PADMRAFLDR ADAESMPALC
ARASGAELC
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