| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4931 |
|---|
| Symbol | |
|---|
| ID | 8547339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 6806464 |
|---|
| End bp | 6807114 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646389605 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003269313 |
|---|
| Protein GI | 262198104 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGGAC AGCAAAAGGC ACGAGGCGGG CCCGCGCGCA GCGGCGACGC CTCCGACGAG
CGAGAGCTTG TCGATCGCGC CCGAGACGGC GACACCGAGG CCTTTCGCGC GCTCTATCAG
CGCTATCACC GCCGGGTGTA CGCGTTGGCC TACGGCGTCG TGCAGAACAA AGAAGACGCC
ATGGACGTGG TCCAGGAGGG CTTCATCAAA GCCCACCGCT ATCTCGACCG CTTCGAGGGC
AATTCCAGCT TCTACACCTG GCTCTACCGC ATTGTCATGA ACCTCTCGAT CGACCATATC
CGCAAGCACA AGCGGGTGCG CCACGTCGAC TTCAACGACG CCATCTCGCA CGGCCAAGAC
GACGCCGCCT CCGAGGACTC GCTGCTGCCG CGGGTGCTGG GCCAGAACCC GGGCAAGTCG
CTGGTGCGCA AAGAGATCCG CGAGCAGATC AGCGCGGCCC TGGCCAAGCT GTCCGACAAG
CACCGGGCCG TGCTGGTGAT GCGCGAACTG GAGGGAATGA GCTACGAGGA GATGGCGCAG
GCCATGGAGT GCTCGAAGGG CACCATCATG TCGCGCCTGT TCCACGCCCG CCGCAACATG
CAGCAGCATC TGCTCGAGTA CATGGGCGGG CAGAAGGACC TGGAGGCGTG A
|
|---|
| Protein sequence | MDGQQKARGG PARSGDASDE RELVDRARDG DTEAFRALYQ RYHRRVYALA YGVVQNKEDA
MDVVQEGFIK AHRYLDRFEG NSSFYTWLYR IVMNLSIDHI RKHKRVRHVD FNDAISHGQD
DAASEDSLLP RVLGQNPGKS LVRKEIREQI SAALAKLSDK HRAVLVMREL EGMSYEEMAQ
AMECSKGTIM SRLFHARRNM QQHLLEYMGG QKDLEA
|
|---|
| |