Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_4900 |
Symbol | |
ID | 8547307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 6765279 |
End bp | 6767132 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 646389573 |
Product | gamma-glutamyltransferase |
Protein accession | YP_003269282 |
Protein GI | 262198073 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0405] Gamma-glutamyltransferase |
TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.608373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.737431 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCCGC GAAACCGCCT CACACGCTCC CTGCTCTGCC TCGCGGCCGC GACCCTGCTC GCGCTGCCCG CGGCGAGCTG CAAGCGCTCC CAGACCTCAG ATCCCGCGCC GGCCGCGCAG CCGCTCGAGG CCCAGACCGG CCCCGACGAC AGCGGCCACA AGCTGCCGGT CAAAGACGGC GAGGACACCG CGGTCGGCAC GCGGGGCGGC GTCAGCAGCG CCGAGGCCAA CGCCAGCGAG ATCGGCCTGG CCATCCTGCA GCGCGGCGGC AACGCCGTCG ACGCCGCCAT CGCCGTGGGT TTCGCGCTCG GCGTCACCCA CCCCAGCGCC GGCAACATCG GCGGCGGCGG CTTCATGATC ATCCGCCTGC CCGACGGCAA GACCACGGCC ATCGACTACC GCGAGATGGC GCCCGGCAAG GCCAGCCGCG ACATGTACCT CGACGCCGCC GGCGAGGTCA CCAATGACAG CCGCATGGGC CCGCGCGCGG CCGGCATCCC GGGCGTAGTG CGCGGCTTTG CCAAGGCGCA CGCCATGTAC GGCTCGCTGC CCTGGGAGGA CCTGATCATG CCGGCCGTGA AGCTCGCGCG CGAGGGCTGG GCGCTCGACA GCCACCACGC CGACGACCTC GGCTGGGGCA CCGAGCGCAT GGACAAGTAC GCGGCCGCCC TGGCCGAGAG CGGCGGCCCC ACGCCCGAAC TCCAGGCCGC CCTCGAGTAC ACCCTGGCCA CCTTCCGCAA AGCCGACGGC AGCGCCTACC AGACCGGCGA GGTGTGGAAG CAGCCCGACC TCGCCGACAC CCTCGAGGCC ATCGCCACGC AGGGCGCGGA CGCCTTCTAC ACCGGCCCGC TGGCCGAGAA GATGGCCAGC GAGGTGCAGG CCATGGGCGG CATCTGGACC GCCGCCGACC TCGCCAACTA CAAGGCCGTG GTCCGCGAGC CCGTGGTCTT TGGCTACCGC GGCCACGAGA TCACCACCAT GCCGCCCCCG TCTGCCGGCG GCGTCGTGCT GCGCCAGATC CTGGCCGCCA GCGAGGTGCT CGGCCTCTAC GAGCTCGACT GGGACTCGGA CCTGCGCCTG CACCTCTACC TCGAGGCCCT GCGCCGCATC TACGCCGACC GCAACCTGCT GCTCGGCGAC CCCGACTTCG TCGACATCCC CATGAAGACC CTGCTCGACG TGAGCTACCT CGAGCAGCGC ATGGCCGACG TACAAAAGGA CAAGGCCACG CCCTCGAGCG AGGTCGGCGC CGGCGTCGAG CTCGAGGAGT CGGCCCAGAC CACCCACTTC TCGGTCGTGG ACGAAAACCG CATGGCCGTC GCCAACACCT ACACCCTCAA CGGCGGCTTC GGCGCCAAGC TGCAAATCCC CGGCACCGGT GTCACCCTCA ATAATGAGAT GGACGACTTC ACCGCCAAAG TCGGCGCGCC CAACATGTTC GGCCTGGTCC AGGGTCCGCA GAACAGCATC GCCCCGGGCA AGCGCATGCT CAGCAGCATG ACGCCGACCA TCGTCACCAA GGACGGCAAG CTGCGCGCCG TGGTCGGCTC CCCGGGCGGG CCCACCATCA CCACTACCGT GGCCCAGATC ATCATGCAGA TCATCGACCA CGAGCGCTCC ATCGCCGAGG CCGTGCGCGC GCCGCGCACC CATCACCAGT GGCTGCCCGA CAGCGTGCTG GCCGAAGACG ACCTGTCGGA CGAAAACCGC GCCGCGCTCG AGGCCCGCGG TCACTCCCTG CGCTCGTGGG GCAGCATCGG CCACGCCAAC GTCATCGAGA TCGACCCCGA GAGCGGCGGC ATCCGCGCCG TCGCCGACCT GGCCCGCGAC GGCGGCAAGG CGGTCGCCTA CTGA
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Protein sequence | MIPRNRLTRS LLCLAAATLL ALPAASCKRS QTSDPAPAAQ PLEAQTGPDD SGHKLPVKDG EDTAVGTRGG VSSAEANASE IGLAILQRGG NAVDAAIAVG FALGVTHPSA GNIGGGGFMI IRLPDGKTTA IDYREMAPGK ASRDMYLDAA GEVTNDSRMG PRAAGIPGVV RGFAKAHAMY GSLPWEDLIM PAVKLAREGW ALDSHHADDL GWGTERMDKY AAALAESGGP TPELQAALEY TLATFRKADG SAYQTGEVWK QPDLADTLEA IATQGADAFY TGPLAEKMAS EVQAMGGIWT AADLANYKAV VREPVVFGYR GHEITTMPPP SAGGVVLRQI LAASEVLGLY ELDWDSDLRL HLYLEALRRI YADRNLLLGD PDFVDIPMKT LLDVSYLEQR MADVQKDKAT PSSEVGAGVE LEESAQTTHF SVVDENRMAV ANTYTLNGGF GAKLQIPGTG VTLNNEMDDF TAKVGAPNMF GLVQGPQNSI APGKRMLSSM TPTIVTKDGK LRAVVGSPGG PTITTTVAQI IMQIIDHERS IAEAVRAPRT HHQWLPDSVL AEDDLSDENR AALEARGHSL RSWGSIGHAN VIEIDPESGG IRAVADLARD GGKAVAY
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