| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4038 |
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| Symbol | |
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| ID | 8546439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 5542483 |
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| End bp | 5543643 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 646388715 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_003268430 |
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| Protein GI | 262197221 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.618341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.564525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCC CGCCGCCGCC GATCCCGCCG CGCCGCTCGC GGATCGCGCG CCGCCCCCGG
CTGCGCAGCC CCGGCCTGGC CGCCGCCGGC CTGGCCGCCG CCCTGCTCGC AGCGCCGCTC
GCGCGCCCGG CCCGGGCCGC GCCGCCGGCC CAACAACAAC AACAACAACA ACAGGCGCAG
GCGGCCCAGG CGCAGGAAGC CGCCAAGCAC ATGTTCGTGC GCAGCGCCCA GACCATGGGC
ACGCGCGTCA CCCTCAGCCT GTGGAGTCAC GACGAGGCCG AGGCCGCGCG CGCCGCCGCC
GCCGTGTTCG AGGAGTTTCA GCGCGTCGAC GCGCTGATGA CCTCGTGGGG TGAGGACAGC
GACGTGGCCC GCATCAACGC CGCCGCCGGC GGCCCCTTGG TGCGCGTCGA CGCCGAGGTC
ATGGGCGTGC TGCAGCGCGC GCAGCAGATC GCGCGCCGCT CCGCGGGCGC CTTCGACATC
ACCGTCGGCG CCTTCCGCGG GCTGTGGAAG TTCGACCAGG ACAAAGACGG CTCCATCCCG
GCCGCCGACG AGGTCGCCGC GCGCCTGCCC CTGGTCGGCT ACCGCGGCGT GCGCCTGGCA
CCGGGCAGCA AGCGCGCCGG CCTGCGCCGC GCCGGCATGC GCATCACGCT CGGCGGCATC
GCCAAGGGCT ACGCGGTCGA TCGCGCCGTG GCCCTGTTGC GCGCCCGCGG CTACCGCGAC
TTCCTCATCC AGGCCGGCGG CGATCTCTTC GTCGCCGGGC GCCGCGGCGA CCGCCCCTGG
CGCGTCGGCA TCCGCGATCC CCGCGGCGAC GCCGCCAGCC CCTTCGCGGT CGCCGAGATC
GAGAACCAGA CCTTCTCGAC CTCGGGCGAC TACGAGCGCT CGGTGGTCCG CGACGGCGTG
CGCTACCACC ACATCCTCGA CCCCAGCAGC GGACGCCCGG CCGATAAAAG CCGCTCGGTC
ACCGTCATGG CCGCCGACGC GCTCACGGCC GACGCCTGGT CCACGGCCCT GTTCGTCATG
GGCGCCGAGC GCGGCCTGCC GCTGGTCGAG AAGCTGCCCG GCGTCGAGGC CGTGTTCGTC
GACGCCGACA ACCGCGTGCA CGTGTCCTCG GGCTTGCAGG ACAAGCTGCA CGTGCTGCGG
CCGCCGACCC CGGGCATCTG A
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| Protein sequence | MTIPPPPIPP RRSRIARRPR LRSPGLAAAG LAAALLAAPL ARPARAAPPA QQQQQQQQAQ
AAQAQEAAKH MFVRSAQTMG TRVTLSLWSH DEAEAARAAA AVFEEFQRVD ALMTSWGEDS
DVARINAAAG GPLVRVDAEV MGVLQRAQQI ARRSAGAFDI TVGAFRGLWK FDQDKDGSIP
AADEVAARLP LVGYRGVRLA PGSKRAGLRR AGMRITLGGI AKGYAVDRAV ALLRARGYRD
FLIQAGGDLF VAGRRGDRPW RVGIRDPRGD AASPFAVAEI ENQTFSTSGD YERSVVRDGV
RYHHILDPSS GRPADKSRSV TVMAADALTA DAWSTALFVM GAERGLPLVE KLPGVEAVFV
DADNRVHVSS GLQDKLHVLR PPTPGI
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