Gene Hoch_4008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_4008 
Symbol 
ID8546404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5499600 
End bp5500088 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content66% 
IMG OID646388680 
Productribosomal protein S7 
Protein accessionYP_003268400 
Protein GI262197191 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0613135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGCA AAGGTGAAGT CCCCAAGCGG AAGGTGCTTC CGGACCCCAA GTTCACGGAT 
TCGCCCTCCG AGACCCGTCG CCGCATTACC AAGTTCATCA ACGTGGTGAT GCGTGATGGC
AAGAAGTCCG TCGCCGAGCG GATTGTCTAC GGATCCCTCG ACCTCGTGGC CGAGCGCGCC
AAAGACGATC CCGTCAAGGT GTGGGAGCGC GCCCTGGGCA ACGTCCGTCC GCGCGTCGAG
GTCAAGTCGC GCCGCGTCGG TGGCAGCACC TACCAGGTGC CCATCGAGGT CCGCAACGAC
CGCTCCCTGG CTCTGGGCAT GCGCTGGCTC GCCAGCTTCG CCCGCCGGCG CAACGAGAAG
ACCATGATGG AGCGCCTCGC CAACGAGATC CTCGACGCCT CGCAGAACCG CGGCGCGGCC
GTGAAGAAGC GCGAGGATGT GCACAAGATG GCCGACGCCA ACCGGGCGTT CGCCCATTAC
CGCTGGTAG
 
Protein sequence
MPRKGEVPKR KVLPDPKFTD SPSETRRRIT KFINVVMRDG KKSVAERIVY GSLDLVAERA 
KDDPVKVWER ALGNVRPRVE VKSRRVGGST YQVPIEVRND RSLALGMRWL ASFARRRNEK
TMMERLANEI LDASQNRGAA VKKREDVHKM ADANRAFAHY RW