| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4003 |
|---|
| Symbol | |
|---|
| ID | 8546399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 5496565 |
|---|
| End bp | 5496894 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 646388675 |
|---|
| Product | Ribosomal protein L25/L23 |
|---|
| Protein accession | YP_003268395 |
|---|
| Protein GI | 262197186 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0089] Ribosomal protein L23 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0908312 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.68966 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGCGC CTCAGACCAT TATCAAACGA CCTCTGCTCA CCGAAAAGAG CACGATCCTG
CGCGAGACCG GCGGCTCCGA CACGATGTTC GACGAGGACG ACGAGTACGC CAAGAAGATC
GTGTTCGAGG TGGCTAAAGA CGCCAACAAG ATCGAGATTC GCCACGCCGT GGAGACGCTC
TTCAACGTGA GCGTCCGCGA CGTCCACACG ATGGTCGTGC GCGGCAAGCG CAAGCGTCTC
GGTCGTTTCA TCGGGCGCCG TCCGGCCAGC AAGAAGGCCA TCGTGACGCT GGCGGCCGGG
GACAACATCG AGTTCTTCGA GGGAGTGTAG
|
|---|
| Protein sequence | MRAPQTIIKR PLLTEKSTIL RETGGSDTMF DEDDEYAKKI VFEVAKDANK IEIRHAVETL
FNVSVRDVHT MVVRGKRKRL GRFIGRRPAS KKAIVTLAAG DNIEFFEGV
|
|---|
| |