Gene Hoch_4001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_4001 
Symbol 
ID8546397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5495429 
End bp5495698 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content56% 
IMG OID646388673 
Productribosomal protein S19 
Protein accessionYP_003268393 
Protein GI262197184 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0185] Ribosomal protein S19 
TIGRFAM ID[TIGR01050] ribosomal protein S19, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.142935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.648316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGTA GCGTCAAAAA AGGTCCCTTC ATCGACGATC ATCTGATGAA GAAGGTCGTC 
ATAGCCCAGA AGGACAACTC GAAGAAGGTC ATCAAGACCT GGTCGCGTCG CAGCACCATC
TCGCCCGAGA TGGTCGGCCT GACCTTCGCT GTCCACAATG GGAAGAAGTT TATCCCGGTG
TTCGTGACCG AGAATATGGT CGGCCACAAG ATGGGTGAGT TCGCTCCCAC GCGGACCTAT
CACGGTCACA CGGGCGAGAA GAAGCGCTGA
 
Protein sequence
MPRSVKKGPF IDDHLMKKVV IAQKDNSKKV IKTWSRRSTI SPEMVGLTFA VHNGKKFIPV 
FVTENMVGHK MGEFAPTRTY HGHTGEKKR