Gene Hoch_3994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3994 
Symbol 
ID8546390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5492509 
End bp5492838 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content65% 
IMG OID646388666 
Productribosomal protein L24 
Protein accessionYP_003268386 
Protein GI262197177 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0198] Ribosomal protein L24 
TIGRFAM ID[TIGR01079] ribosomal protein L24, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.135395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.669985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGA CTCACGTCCG GCGCGGCGAC ATGGTCGTCG TGACCAAAGG CAAAGACAAA 
GGGAAGCGCG GCGCGGTCAA GCGCGTGCTG ACCAACGGTC GTATCGAGGT CGAGAAGGTG
AACATGGTCA AGCGCCACAC CAAGCCGACC CAGACGAACC CGCACGGTGG GATCATCGAG
CAAGAGGGCT CCATCGCCAT CGCCAACGTG GCGCTGTGGT GCGACGCGTG CTCGGCCGGC
CGGCGGGCCC GCCGCTCGGT CGACGAAAGC GGCAACAAGT CCCGCCTGTG CACCCAGTGC
GCGGGCGAAT TTTCGAATCC AGGTCTGTAA
 
Protein sequence
MSKTHVRRGD MVVVTKGKDK GKRGAVKRVL TNGRIEVEKV NMVKRHTKPT QTNPHGGIIE 
QEGSIAIANV ALWCDACSAG RRARRSVDES GNKSRLCTQC AGEFSNPGL