Gene Hoch_3991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3991 
Symbol 
ID8546387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5491148 
End bp5491546 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content66% 
IMG OID646388663 
Productribosomal protein S8 
Protein accessionYP_003268383 
Protein GI262197174 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.246659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.8759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATGA CAGATCCCAT CGCCGATTTT CTGACCCGTA TCCGCAACGG TATCCACTCG 
CGCCACAGCT CGGTCGCGTG CCCGCGTTCG CGGGTGAAGA CGCGCATCGC CGAGATCCTG
CGCGACGAGG GGTACCTCGA GGCCGTGACT CTCACGGACG ACGACAAGCA GGGGGTGCTC
ACCGTGCGGC TGCGCTATCA CAGCCGCAAC GCGTGCGCCA TCTCCGGCCT CAAGCGCGTC
TCCAAGCCGG GTCAGCGCCG TTACGTGAAC TCCAGCGACG TCCCCAAGGT CCGCAATGGC
CTGGGCGTCG CGATCATCTC CACCTCGCAG GGCGTGATGA CCGACCGCGA CGCGCGTCAG
CGCGGTGTCG GTGGCGAGGT CCTCTGCGAG GTCTGGTAA
 
Protein sequence
MSMTDPIADF LTRIRNGIHS RHSSVACPRS RVKTRIAEIL RDEGYLEAVT LTDDDKQGVL 
TVRLRYHSRN ACAISGLKRV SKPGQRRYVN SSDVPKVRNG LGVAIISTSQ GVMTDRDARQ
RGVGGEVLCE VW