| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3974 |
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| Symbol | |
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| ID | 8546370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5476122 |
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| End bp | 5478980 |
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| Gene Length | 2859 bp |
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| Protein Length | 952 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646388646 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003268366 |
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| Protein GI | 262197157 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.146468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCG CGGGATTCAA ATGGTTCGTG GCCTGGCGCT ATCTGATGGC GCGGCCGCGG
CGCCTGAGCC CGGCGCTGTT TCTCGTGGCC GGCCTGTCGC TGGTCACGAG CACCGGCGCG
AGCCTGCTGG CCGAGGTGTT TCGCCCGCCG GGCACGCGCT CATTCATCTC GCTCGGCGCG
GCCGAGCTGT TCGCTGGTTG CGGGCTGATT CTCGGTCTGT GGGGCGCGAT CGCGCTGGTC
GCGGGTCTGT TTCGCTTCTG CCGCTCGCAG CTCGAGGGCA GCTCGGTGCC GGCGCTGGCG
CTGGCCTCGT TCATGACCCT GGGCGTCGGC GTGTTGGCGC GCTCGGCCGA GGACGCGGCC
ACCAGCCGGG TCGGGCTGGG GCTGATGGCG CTGTCGGCGC CGCTGCTGCT GGCCTCGTTG
GTGCTCTACC TGCGCGCTGC CGGGCGCCGC GCCTGGGGCG TCTTGGCCTC GTCGGCGCTG
CTGCTCGCCG CGGGCGGGCT CACCAGCCTG TGCGCGCACG CGCTGCTCGC GATCGACGCG
GTGCCGCCGG CCGAAGCCGC GCTGCTCATC GCGCTGGCGC TGTGGGCGGT CGCCGCAGCC
GTGGCCGGCG TCGCGGCGGT GCGCCAGCGC GCCGTGCAGC GGCCCAGCCG CGTGGGCCTG
GTCGCCGCGC TGCTGCTGCT GATCGGCGCC GGCTACACCT GGTCGGCGAG CGGCGCGAGC
GAGCCCCTCG AGCCGGCGCT GGCGCCGCCC GCGGACACGC TCTTCGAGCT GGTCGTCGAC
ATCGGCGCGA TCGCGCCGAT CGTGGCGGCC GCGGGTGGGG CGCTGGCGCT GGTGTGCTTG
CTGGTGTGGT TCCGGCGTCG CTCCGAGCAC GCCACCGCCC CCGCGCCGCG TCTGCTCGCG
CCGCTGTCGG TGGGGCTGGG GCTGCTCGGC GGCTGCACCT GGCTGGCCAG CCTGGTGTTC
ACGAGCGGAT TCGAGCCCTT CCTGGTGCTG TCCGCGCGGC AGTTCTCCGA GCAGCAGGTG
CTGCTGGCGG CCACCGTGCT CCTGGCGCTC GGCCAGCTCA TCCTGCTGCT GGCGGCCATG
CGCTACTTCT TCACCTTCTT CACCACGGTG AGCGTCGCCG GCGTGACCAT CGGCTCGATG
GCCCTGGTCA TCGTGCTCAG CGTGATGAGC GGCTTCGAGA TCGATCTGCG CAACAAGATC
CTCGGCTCCA ACGCGCACAT TCTCATCACC AAGGAGGGCG ACGAGCCCTT CACCGAGTAT
CGTGAGCTGG TCGAGCGCGT GCTCGCGGTG CCCGGCGTGG TCGCCCAGAT GCCGTACCTC
ACCAGCGAGG TGGTCATCGC GGCCAACAGC AACTACGCCA ACGTCATCAT CAAGGGCGTC
GATCCCGAGA CCGTCGGCAC GGTCACCGAG CTGGGCAAGA ACACGCGCCA GCCCGACGCC
ATCGCGCGGC TGTATCCGCT CGCCGAGGAT GGCTCGGTTA TCGGCCGCCC GGCCGAGAAC
AGCGACGGTG GCGGCGAGAC GCCCGACGCG GGCGCCGGCG CCGAGACCGC GGGGCAGGGC
AGTGAGTTCG ATCCGCCGCC CGACGACATG GAGCTCGACT GGGACGTGCC CACGGATTTT
TCCGGTGGCG GCGACGGCGA CGGCGGTAGT GACGGCGCGG ACAGCGACGA GCTCCCCAGC
GGCGCTGACG AAGCATCCGC GATGCTCGAC CGCCCGCCGG CCGACATGGA GCTCGACTGG
GACGAGCCGA TGGACTTTTC CGGCTCGCCG TCCGAAGACG AGCCCGGCGG CGTCGCAGGC
GAAGCGGCGG ACGACCCGCT GGCGTTCGAC GATGAGGTGA CCGCGGAGCC AGGGATGGCG
CCGGGGGAAA TCGACACCGC GGACGATCTC CCCTTTGGCC GCGAGCGCGC GCTCGAGCTG
GGCGATTCCT TCGCCGAGGA GCTGGGGCGC GAGATCGTCG CCCGGGCCAC GAACGAGCAG
GAGCGCGAGG CGCTGGACGA CGAGCTCGAC GTCGACGAGG CCATCGCGCC GGCCAAGAAG
CGCGTGCGCA TCTCGCCGCG GGTGGCGCGG CTGCCCGGCG TCATCGTCGG CAAGGAGCTG
GTCAAGAACC TGCATCTCTA CGCCGGTCAG GAGGTGCGCA TCATCTCGCC GCTGGCCGAG
GATACGCCCG CGGGGCCGGT TCCGCGGACT CGCTATCTGC GGGTCGCCGG CACCTTCTTC
ACGGGCATGT ACGAGTACGA CTTCAAGTAC GTGTACGTGC CGCTCGACAC GCTGCAGCTC
TTCCTCGACA TGGCCGAGCA GGTCGAGGGC ATCGAGATCC GGGTCGAGGA GCCGGCCGAG
ACCGATCTCG TGGTCCGCGA GCTGCGCGCG GCGCTGCCCG AGACCTTCCG CGTCCAGGAC
TGGAAGGAGA TCAACCGCAA CCTGTTCTCG GCGCTCAAGC TGGAGAAGAT CGCCATGTTC
CTGGTGCTGG CGATCATCAT CCTGGTGGCC TCGTTCTCGA TCATCAGCAA CCTGATCATG
GTCGTGGTCG AGAAGGCCAA GGAGATCGCG CTGCTCAAGA CCCTGGGCGC GGCCGACCTC
AGCGTGGTCG GGATCTTCAT CGCGCAGGGC TTCTTCATCG GCTTCATCGG CACCATCGCG
GGCGTGGGCC ACGGCCTGCT GGCCTGCTAT CTCGGCAACG TCTACGGGCT GCCGCTCGAT
CCCGAGGTCT ATTACATCGA TCGCCTGCCC ATCCACGTGG AGTTCATCGC GGTGACCGCG
GTCACCATCG CCGGCATCGT CATCAGCGTG CTGGCCACGC TGTACCCCGC GATGATGGCC
GCGCGCTTGC GACCCATGGA GGGGCTGCGT TACGACTGA
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| Protein sequence | MKRAGFKWFV AWRYLMARPR RLSPALFLVA GLSLVTSTGA SLLAEVFRPP GTRSFISLGA
AELFAGCGLI LGLWGAIALV AGLFRFCRSQ LEGSSVPALA LASFMTLGVG VLARSAEDAA
TSRVGLGLMA LSAPLLLASL VLYLRAAGRR AWGVLASSAL LLAAGGLTSL CAHALLAIDA
VPPAEAALLI ALALWAVAAA VAGVAAVRQR AVQRPSRVGL VAALLLLIGA GYTWSASGAS
EPLEPALAPP ADTLFELVVD IGAIAPIVAA AGGALALVCL LVWFRRRSEH ATAPAPRLLA
PLSVGLGLLG GCTWLASLVF TSGFEPFLVL SARQFSEQQV LLAATVLLAL GQLILLLAAM
RYFFTFFTTV SVAGVTIGSM ALVIVLSVMS GFEIDLRNKI LGSNAHILIT KEGDEPFTEY
RELVERVLAV PGVVAQMPYL TSEVVIAANS NYANVIIKGV DPETVGTVTE LGKNTRQPDA
IARLYPLAED GSVIGRPAEN SDGGGETPDA GAGAETAGQG SEFDPPPDDM ELDWDVPTDF
SGGGDGDGGS DGADSDELPS GADEASAMLD RPPADMELDW DEPMDFSGSP SEDEPGGVAG
EAADDPLAFD DEVTAEPGMA PGEIDTADDL PFGRERALEL GDSFAEELGR EIVARATNEQ
EREALDDELD VDEAIAPAKK RVRISPRVAR LPGVIVGKEL VKNLHLYAGQ EVRIISPLAE
DTPAGPVPRT RYLRVAGTFF TGMYEYDFKY VYVPLDTLQL FLDMAEQVEG IEIRVEEPAE
TDLVVRELRA ALPETFRVQD WKEINRNLFS ALKLEKIAMF LVLAIIILVA SFSIISNLIM
VVVEKAKEIA LLKTLGAADL SVVGIFIAQG FFIGFIGTIA GVGHGLLACY LGNVYGLPLD
PEVYYIDRLP IHVEFIAVTA VTIAGIVISV LATLYPAMMA ARLRPMEGLR YD
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