| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3939 |
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| Symbol | |
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| ID | 8546335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 5432686 |
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| End bp | 5433945 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646388611 |
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| Product | lysine 2,3-aminomutase YodO family protein |
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| Protein accession | YP_003268331 |
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| Protein GI | 262197122 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1509] Lysine 2,3-aminomutase |
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| TIGRFAM ID | [TIGR00238] KamA family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0153502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0100362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGCCCC GCCGCCCGCT GCCCACCCTG CCCTCGCCGC CCGCTACCCA GCCGGCGGCG
CCGCCGCTGC GCCGCGAACA GGTCGCTGAC GAGGACTGGA ACGACTGGCG CTGGCAGGCG
CGCAATATGC TCACCACGGC CGAGGAGTTT GCCCGCGTGG TCGAGCTGAG CGACGAGGAG
CGCGCTGCGC TCGTGGATAC GGCGCCGATG TTTCGCACCG GCGCCACGCC GTATTACGCC
AGCCTGATGG ACCCGGCGCG CGCCGACTGC CCGATCCGCA AGCAGGCCAT CCCCTCGCGG
CGCGAGCTCG ACTTCGCGCC CGAGGAGCTG CGCGACCCGC TGGGCGAGGA CAGCCAGAGC
CCGGCGCCGT GCGTGGTGCA CAAGTACCCG GACCGGGTGC TGCTGCTGGT GCTCGACCGC
TGCGCGATCT ACTGCCGCCA CTGCAACCGC CGGCGCCTGG TCGGCGGTGA CGCGCCGCCC
GCGCGCGACG ACATCGACGC CGGCATCGAC TACATCGCGC GCACGCCGCA GATCCGCGAT
GTGCTGCTCT CGGGCGGCGA TCCGCTGCTC TTGTCGAATG CGCGCCTGGC CCACATCCTG
GGCCGCCTGC GCGCGATCGA GCACGTCGAG ATCATCCGCA TCGGCACGCG CCTGCCGGTG
GTGCTGCCGA TGCGCATCGA CGACGAGCTG TGCGCGACCT TGCGCCGCTT CCACCCGCTG
TACATCAACA CGCACTTCAA TCACCCCAAG GAGATCACGA GCGAGGCGCG CGCGGCCTGC
GAGCGCCTGG TCGACAGCGG CATCCCGGTG GGCAACCAGG CGGTGCTGCT GCGCGGGGTC
AACTCGTCTG TGCGCTGCAT CCGGGCGCTG ATGCGCGCGC TGCTGCGCAT GCGCGTGCGT
CCGTATTACC TGTTTCAGGG GGATACGGTG CTGGGCACGG ACCATATGCG CACGCCGGTG
GACGCGGCCA TCGCGCTGAT GGAGGGGCTG CGGGGCTGGA CCAGCGGCAT GGCGATTCCG
CACATGGTCA TCGACGCGCC CGGCGGCGGC GGCAAGCTGC CCTTTGGCCC CGAGTACGTG
CTCGAGCGCC ACCCGGACCA CGTGCTGGTG CGTACCTACC GCGGCCGCGT GGTGCGCTAT
CCCGAGCCGC GTGAGCGCGA CTGCCGGGTG AGCTACGACG AGGTGTTCTT CGCCGACGCT
GGGGACACGG ACGGGGACGA CCCCGGCCTG CACACGCTCG ACGCCGCGTC CGAGGCATGA
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| Protein sequence | MSPRRPLPTL PSPPATQPAA PPLRREQVAD EDWNDWRWQA RNMLTTAEEF ARVVELSDEE
RAALVDTAPM FRTGATPYYA SLMDPARADC PIRKQAIPSR RELDFAPEEL RDPLGEDSQS
PAPCVVHKYP DRVLLLVLDR CAIYCRHCNR RRLVGGDAPP ARDDIDAGID YIARTPQIRD
VLLSGGDPLL LSNARLAHIL GRLRAIEHVE IIRIGTRLPV VLPMRIDDEL CATLRRFHPL
YINTHFNHPK EITSEARAAC ERLVDSGIPV GNQAVLLRGV NSSVRCIRAL MRALLRMRVR
PYYLFQGDTV LGTDHMRTPV DAAIALMEGL RGWTSGMAIP HMVIDAPGGG GKLPFGPEYV
LERHPDHVLV RTYRGRVVRY PEPRERDCRV SYDEVFFADA GDTDGDDPGL HTLDAASEA
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