| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3903 |
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| Symbol | |
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| ID | 8546299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 5384691 |
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| End bp | 5386253 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646388575 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_003268295 |
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| Protein GI | 262197086 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.23664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.18215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCCG TGAGTGAACA TCTCGACCGC GCCCCTGTTC TCCTTGGCGA GTCACCGCTG
GTGCTCGAAG ACATCGTCCG CGTGGCCCGC GACGGCGCCG CCGCGCAGCC CGGGCCCAGC
GCCCTCGAGG CCATGGCGAA ATCGCGCGCC GTGGTCGACA GCATCCTGAC TGGCGGCGAC
GACGCGCCTC TGGTCTACGG CGTCAACACC GGCTTTGGCG CGCTGGCCGA GGTCCGCATC
TCGTCGCGCC AGATCGCCGA GTTGCAGCGC AATCTGGTGC GTTCGCACGC GGTCGGCGTG
AGCACGCCGC TGCCGCGCGA GGCCGTGCGC GCCATGATGA TGTTGCGCGC CCAGGTGCTG
GCGCGCGGCC ACAGCGGCTC GCGTCCGATG ATCTGCGAGC GTCTGTGCGA GCTGCTGGCG
CGCGGCGTCC ACCCCGAGAT CCCCAGCCGC GGCTCGGTGG GCGCCTCGGG CGATCTCGCG
CCGCTGGCGC ATCTGGCGCT CACGCTCATC GGCGAGGGCC ACGCCGAGTA CCAGGGCGAG
CGACTGCCGG CGGCCGAGGC CTTGCGCCGG GCCGGCCTAA CGCCGGTCGA GCTGGCCGCC
AAGGAGGGCA TCACGCTGCT CAACGGCACC CAGCACATGA CCGCGCTGGG CGCGCTGAGC
GTGTTCGATG GCGAGCACAC CTGTCGCGTC GCCGACCTCG CCGGCGCCAT GTCGCTCGAG
GCGCTGCAGG GCACGGCGCG GGCCTTCGAC GCGCGCGTGG CCGGCGCGCG CCCGCACCCC
GGGCAGATGG CGGTGGCCGA GTCGCTGTGC GAGCTGCTGG CCGAGAGCGA GATCGCCGAC
TCCCACCGCG ACTGCGGCAA GGTCCAGGAT CCCTACTCGC TGCGCTGCAT GCCGCAGGTC
CACGGCGCCA CCCGCGACGT GCTCGCGTAC GCGCGCGCGG TGCTCGAGCG CGAGGCCAAC
GCGTGTACCG ACAATCCGCT GGTGTTCCTC GACGAGTCGC TCGCGCACGG CGGCGTGCTG
ATCTCGGGCG GCAACTTCCA CGGCCAGCCT GTGGCCCTGG CGCTCGACGC CGCGACCATG
GCGGTGGCCG AGCTGGCCAA CATCAGCGAG CGGCGCATCG AGCAGCTCGT CAACCCGGCG
CTCTCCAGCG GGCTGCCGCC CTTCCTGGCG CCCTCGAGCG GCCTCAACTC GGGCTACATG
ATCGCCCAGG TGAGCGCGGC GTCCCTGGTG TCCGAAAACA AAGTCCTGGC GCACCCGGCC
TCGGTCGATT CCATCCCCTC TTCGGCCGGA CGCGAGGACC ACGTGTCCAT GGGCGCGCTG
TCGGCGCTCA AGCTGCGCGA TGTCCACGAC CACGTGCGCA CGGTGCTCGC CATCGAGGTG
CTGTGCGCCA CGCAGGGCAT CGATCTGCGC GCGCCGCACA AGCCCAGTGT CAAGCTCCGG
GCCGCGCACG CCTGCGTCCG CGCGCGGGTT CCCTTCATGG AGCGCGACCG GCCCATCTAT
GAAGATGTCC AGGTGGTGCG CGCGCTCATC GACAGCGGCG AGCTGCTGGC CGCGGTGGCC
TGA
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| Protein sequence | MAAVSEHLDR APVLLGESPL VLEDIVRVAR DGAAAQPGPS ALEAMAKSRA VVDSILTGGD
DAPLVYGVNT GFGALAEVRI SSRQIAELQR NLVRSHAVGV STPLPREAVR AMMMLRAQVL
ARGHSGSRPM ICERLCELLA RGVHPEIPSR GSVGASGDLA PLAHLALTLI GEGHAEYQGE
RLPAAEALRR AGLTPVELAA KEGITLLNGT QHMTALGALS VFDGEHTCRV ADLAGAMSLE
ALQGTARAFD ARVAGARPHP GQMAVAESLC ELLAESEIAD SHRDCGKVQD PYSLRCMPQV
HGATRDVLAY ARAVLEREAN ACTDNPLVFL DESLAHGGVL ISGGNFHGQP VALALDAATM
AVAELANISE RRIEQLVNPA LSSGLPPFLA PSSGLNSGYM IAQVSAASLV SENKVLAHPA
SVDSIPSSAG REDHVSMGAL SALKLRDVHD HVRTVLAIEV LCATQGIDLR APHKPSVKLR
AAHACVRARV PFMERDRPIY EDVQVVRALI DSGELLAAVA
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