| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3866 |
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| Symbol | |
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| ID | 8546261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5320723 |
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| End bp | 5321577 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646388537 |
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| Product | peptidase C1A papain |
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| Protein accession | YP_003268258 |
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| Protein GI | 262197049 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4870] Cysteine protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.401195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.15996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGCG GCGCGATGAA CGTGGTCACG GTGGCGGGCA AGGCCCTGCC CGACAGCAAG
ATGCGGCTGT GGCTGCCCGC GGTGCAGCGC TTCGAGGATC GCGACTGGGA CGCCAGCGAT
CGCGTGTTCG AGCGCGCCCG GCCGGCGCTG GCGCAGACCG CCGGGCGCGT CGGCGAGGGC
GGCGAGCACG TGCTGCCGAT GCACACGCCG GTGAGCGACC AGGGCAACCT GGGCACCTGC
GCGGCCAACG CGTGGATGGA CGCGCTCGAG ATCCTCATGG GCATCGAGAA CCAGCGCCAG
GTGGTGCAGC TCAGCCGCCT GTTCGTGTAC TGGACCGCGC GCGAGCTCAC CGGGTTGCAG
GGCGAGGACA GCGGCGTGTA TCTGCGCGCC GTGGCCCACC AGTTGCGCAA GATCGGCGTG
GTCGAGGAGT CGTTTCTGCC GTACCGCGAC GAGCCCACGG CGGTGCTGAG CGCGCCCTCG
GTGAGTCTGT ACACGATGGC CAGCAACCAC CGGCTCAGCA GCTTCTACCG CATCGTGAGC
GACGGCCAGA AGAAGCTCGA CGAGATCGAG CTGGCGCTGC GCGCCAATCA CCCGGTGGTC
TCGGCCACCG ACGTGAGCAG CGAGTTCCTC GACTACCGCG GCGGCGGCCA CGTGTTCGGG
CCGCCGGCGC TGTCCGAGGG GCTGCACGCC ATGATCCTGG TCGGCGTGCG CCACCGCGGC
GGCCGGCGCG AGTTTCTGCG CCGCAACTCC TGGGGCGTGG GCTGGGGCGA CGGCGGCCTG
GTGTGGTGCG ACGAGGACTA CGTGCTGCTC GACGACGACG TCTGGGTGGG CACGCGCATG
CAGGGCCTCG ATTAG
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| Protein sequence | MSGGAMNVVT VAGKALPDSK MRLWLPAVQR FEDRDWDASD RVFERARPAL AQTAGRVGEG
GEHVLPMHTP VSDQGNLGTC AANAWMDALE ILMGIENQRQ VVQLSRLFVY WTARELTGLQ
GEDSGVYLRA VAHQLRKIGV VEESFLPYRD EPTAVLSAPS VSLYTMASNH RLSSFYRIVS
DGQKKLDEIE LALRANHPVV SATDVSSEFL DYRGGGHVFG PPALSEGLHA MILVGVRHRG
GRREFLRRNS WGVGWGDGGL VWCDEDYVLL DDDVWVGTRM QGLD
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