Gene Hoch_3851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3851 
Symbol 
ID8546244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5301996 
End bp5302448 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content72% 
IMG OID646388520 
Productribosome-binding factor A 
Protein accessionYP_003268243 
Protein GI262197034 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.258524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.192536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGG GGAACCGCAG ACAGCGAGTC GGCAACGCGT TGCGCGAGGT GCTCACCGAG 
CTCGTCGCCC GCGAGCTCAA GGATCCGCGC GTGCACGCGG CCGGTCTGGT GAGCATCAAC
CAGGTCGAGC TCAACCGCGA TCTCAGCGTG GCGTTCATCT ATGTCTCGTT CGTGGGCGCG
CCCGACGCCC GCGCTGAGAA GCGCGCGCTG GACGGTCTGC AGGCCGCGGC CGGGTTCTTG
CGCGGCCCCG CGGCGCGGCG GCTCAAGCTG CAGCGGGCGC CCGAGCTGCG CTTCATGGAC
GATCCGCGCG GCGCCTTTGC CGAGCAGATG CGCTCGCTGG TGCGCGATGA CGAGGTCCGC
GCCGCGGCCG CGCAGCGCGA CGACGAGGAC GAGCACGACG ACGCTGCCGA GAGCCGGCAG
GGCGACGACA GCGGCGAGCG CGATCCCGTC TGA
 
Protein sequence
MAQGNRRQRV GNALREVLTE LVARELKDPR VHAAGLVSIN QVELNRDLSV AFIYVSFVGA 
PDARAEKRAL DGLQAAAGFL RGPAARRLKL QRAPELRFMD DPRGAFAEQM RSLVRDDEVR
AAAAQRDDED EHDDAAESRQ GDDSGERDPV