| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3849 |
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| Symbol | |
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| ID | 8546242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5299513 |
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| End bp | 5300628 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 646388518 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_003268241 |
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| Protein GI | 262197032 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0712752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.22473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTG AGCGCAGCAG CCCCGAGCCC GAGGAGCGGC GCCGGCCCGC GCGGGACGCC
GCGAGCGGGC AGGGCGGCGC GAACAAGAGC GCGCTGCACG GCGTGTTGGT GGTGGACAAG
CCGGCCGGGA TCACCTCGGC GGCCGTGGTC GCCCGGGTCA AGCGTCACCT GGGCGTGCGC
CGCGTCGGCC ACACCGGCAC GCTCGATCCC ATGGCCACCG GGGTCTTGCC GCTGTGTCTG
GGCGAGGCCA CCAAGATCGC CGGCTACCTG CTGGCCGAGG ACAAGGGCTA CGAGGCCGAG
CTGCTGCTCG GGGTCGAGAC CGACACCCTC GACGCCGAGG GCCAGGTCAC CGCGCGCGCG
CCCGAGGCCG CCGCGGCCGT GGACGAGGCC GCGCTGCGCC GCGTGCTGGC CACATTCGTC
GGCCCCGGCG AGCAGGTGCC GCCCATGTTT TCGGCGCTCA AACGCGGCGG TAAGCGGCTG
CACGAGCTGG CCCGCGCCGG CCAGGAGGTC GAGCGGCCGC CGCGTCCGGT GGTGATCCAC
GAGCTGCTGC TGCACGCCTT TGCGACGCCG CGCGCGCGCT TCTCCGTGCA CTGCTCCAAG
GGCACCTACG TGCGCAGCCT GGCCGACGAC ATCGGCCGCG CGCTCGGCTG CGGCGCCCAC
CTGAGCGCCC TGCGGCGCAC GCGCTCGGGC GCCTTTGCCA TCGCCCAGGC GATCCCGCTA
GCCGCGATCG AGGACGATCC CGAGCGCGCG CGCGCGGCGC TGGTGTCGCC GGCCGTGGCC
GTGGCGCATC TGCCCGCGGT GGCGATCCCG AGCGAGGGCG TCCACGACAT CGCCTGCGGC
AAGCCCATGA GCTGGCAGCG GCTGAGCCTG CTGGCGCCCG AGGCCGCGGC CATCGCGTGC
GACGCCCCGG TGCGCCTGCT GCTGCCCAGC GGCGAGCTGG TGGCGCTGGC CGAGCGCGTG
GCGACAAAAA ATGCCCCCGA CATGTCGAAC AGGGGCGCCG ATCAGTTGCA CTACTTACGC
GGGTTTTCTT ATGACTTGAC GAACCGGGCG GCTTCCTCCA ATCTCTCCGG CTCCAGTGGC
CGGGAGCGTG CCCGGCAAAG GCGCTCCGAG CGCTGA
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| Protein sequence | MSTERSSPEP EERRRPARDA ASGQGGANKS ALHGVLVVDK PAGITSAAVV ARVKRHLGVR
RVGHTGTLDP MATGVLPLCL GEATKIAGYL LAEDKGYEAE LLLGVETDTL DAEGQVTARA
PEAAAAVDEA ALRRVLATFV GPGEQVPPMF SALKRGGKRL HELARAGQEV ERPPRPVVIH
ELLLHAFATP RARFSVHCSK GTYVRSLADD IGRALGCGAH LSALRRTRSG AFAIAQAIPL
AAIEDDPERA RAALVSPAVA VAHLPAVAIP SEGVHDIACG KPMSWQRLSL LAPEAAAIAC
DAPVRLLLPS GELVALAERV ATKNAPDMSN RGADQLHYLR GFSYDLTNRA ASSNLSGSSG
RERARQRRSE R
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