Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3840 |
Symbol | |
ID | 8546233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5289728 |
End bp | 5292013 |
Gene Length | 2286 bp |
Protein Length | 761 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 646388509 |
Product | phosphoribosylformylglycinamidine synthase II |
Protein accession | YP_003268232 |
Protein GI | 262197023 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain |
TIGRFAM ID | [TIGR01736] phosphoribosylformylglycinamidine synthase II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.619159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.165254 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGATA CACCAGCACA GACGCCGCCG CCGCGACCGC TCGAGCCCGA GGTCACCGAG ACCCTGGCCG CCGAGCACGG CCTGGCCACC GACGAGTTCG AGACCCTGCG CAGCGCCATC GGCCGCATGC CGACCTATAC CGAGCTCGGC ATCGTCTCGG TCATGTGGAG CGAGCACTGC TCGTACAAGT CCTCGCGCGC CCACCTCGGC ACCTTGCCCA CCGAGGGCCC GCGCGTGGTC CAGGGCCCGG GCGAGAACGC CGGCGTGGTC GACATCGACG ACGGCCAGGT CGTGGTCTTC AAGATGGAGA GCCACAACCA CCCCTCGTTC ATCGAGCCCT ACCAGGGCGC GGCCACCGGC GTGGGCGGCA TCTGCCGCGA CGTCTTCACC ATGGGCGCGC GGCCCATCGC CATCGCCGAC TGCCTGCGCT TTGGCCGCCC CGAGCACCCG CGCACGCCGT TTCTGGTCGC CGGCGTGGTC GCCGGCATCG GCGGCTACGG CAACGCCTTT GGCGTGCCCA CCGTCGCCGG CGACGTCGCC TTTGACGCCG GTTACGACGG CAATATCCTG GTCAACGCGT TCTGTCTGGG CGTGGCCGAG CGCGAGCGCA TTTTTCTCGG ACACGCGGCC GGCGTCGGCA ATCCCGTGCT CTACGTCGGC GCCAAGACCG GGCGCGACGG CATCCACGGC GCCACCATGG CCTCGGCCGA GTTCGGCGAG GACGCCCAGG AGAAGCGCCC GAGCGTGCAG GTCGGCGATC CGTTCATGGA GAAGCTCCTG CTCGAGGCCT GCCTCGAGCT GATGCAGTCC GACGTGCTCG TCGGCATCCA GGACATGGGC GCCGCCGGCC TCACCTCGTC CTCGGTGGAG ATGGCCGCGC GCGCGGGCGC CGGCATCGTC CTCGACCTCG AGCGCGTGCC TCAGCGCGAG CGCCACATGA CGCCGTACGA GCTGCTGCTC TCCGAGTCGC AGGAGCGCAT GCTCATGGTC GTTCACCAGG GCCGCGAGGC CGAGGCGCTG GCGATCTTTG AAAAATGGGA CCTCGACGCC GCCGTTGTCG GACAGGTGAC CGACACCGGC CACATCCACG TGCGCATGCA CGGCCAGGTC TACGCCGACC TGCCGATTCC GCTGCTGGCC GAGGGCCTGC GCTACCGCCG GCCCATGAGC CGGCCGGCGT ATCTCGACAA GACCGCGGCC TTTAGCGAGG TCGACATCGA GGCCGCCGAG CCCGCGGCGC TGCAGGCGGC GCTGATGACG CTGCTGTCGT CGCCGAGCAT CGCCAGCAAG GCGTGGGTGT ATCGCCAGTA CGACCACGAC GTGCGCCATG GCACCGCGGT CCGCCCGGGC GCGGCCGACG CCGCCGTGAT GCGCGTGCCC ACGCCCGACG GCGCGCGCGA CAAGGGCGTG GCCATCACCG CCGGCTGCCA GAGCCGCTAC GTGTACCTCG ACCCCTACGA GGGCACGCGC CTGGTGGTCG CCGAGGCCTA CGCCAACCTG GCCGCCGTCG GCGCCGAGCC GCTCGCGGTC ACCGACTGCC TCAACTTCGG CAACCCGGAG AAACCCGAGA TCATGTGGCA GCTCGCCGAG TCGATCCGCG GCATGGGCGA CGCGCTGCGC GCGTTCGAGG TGCCGGTGGT GTCGGGCAAC GTGTCGCTCT ACAACGAGAC CGACGGCAAG GCCATCAAGC CCACGCCCAT GATCGGCATG GTCGGCCTGC TCGACGACGT GCACCAGCAC GCGACCATGG GCTTTGCCCG CGCCGGCGAC GCGGTCGCCG TGATCGGCTC GTTCACCGCT GACCTGGCCG GCTCGAGCTA CCTCGAGCTG GTCCACGAGC AGGTGGCCGG CGTGCCCACG GCGCTCGACA TCTCGGCGGC CAAGACCACC TGCGGCGCGG TGCTGGCCCT GGTGCGCGGC GGCCACCTGT CCTCGGCCCA CGACGTCTCC GACGGCGGCC TGGCCGTGGC CATCGCCGAG TCGGCCTTTG CCGCCGCGGG CGGGCCCGTG GGCGCGAGCC TGGACCTGCC CGTGCATCCG GGCTCGCGCG ACGACTCCAT GCTGTTCGGC GAGGCCCCGG CGCGCTTCGT CATCTCCTAC GCGCCCGAGG CCGGCGAGGC CGTGCGCGCG CTGTGCGAGC AGCACGGCGC CGTGCTCACG GAGATCGGAC ACACGGGCGG CGACGCTCTG CGCATCGCCA TCGACGGCGC GCCCATCATC GACGTGCCCG TGGCCGACGC GCACCGCGCC TATAGCGACA GCTTCGCGGA CGCCGTCGAC CGCTGA
|
Protein sequence | MADTPAQTPP PRPLEPEVTE TLAAEHGLAT DEFETLRSAI GRMPTYTELG IVSVMWSEHC SYKSSRAHLG TLPTEGPRVV QGPGENAGVV DIDDGQVVVF KMESHNHPSF IEPYQGAATG VGGICRDVFT MGARPIAIAD CLRFGRPEHP RTPFLVAGVV AGIGGYGNAF GVPTVAGDVA FDAGYDGNIL VNAFCLGVAE RERIFLGHAA GVGNPVLYVG AKTGRDGIHG ATMASAEFGE DAQEKRPSVQ VGDPFMEKLL LEACLELMQS DVLVGIQDMG AAGLTSSSVE MAARAGAGIV LDLERVPQRE RHMTPYELLL SESQERMLMV VHQGREAEAL AIFEKWDLDA AVVGQVTDTG HIHVRMHGQV YADLPIPLLA EGLRYRRPMS RPAYLDKTAA FSEVDIEAAE PAALQAALMT LLSSPSIASK AWVYRQYDHD VRHGTAVRPG AADAAVMRVP TPDGARDKGV AITAGCQSRY VYLDPYEGTR LVVAEAYANL AAVGAEPLAV TDCLNFGNPE KPEIMWQLAE SIRGMGDALR AFEVPVVSGN VSLYNETDGK AIKPTPMIGM VGLLDDVHQH ATMGFARAGD AVAVIGSFTA DLAGSSYLEL VHEQVAGVPT ALDISAAKTT CGAVLALVRG GHLSSAHDVS DGGLAVAIAE SAFAAAGGPV GASLDLPVHP GSRDDSMLFG EAPARFVISY APEAGEAVRA LCEQHGAVLT EIGHTGGDAL RIAIDGAPII DVPVADAHRA YSDSFADAVD R
|
| |