| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3839 |
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| Symbol | |
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| ID | 8546232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 5288174 |
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| End bp | 5289697 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646388508 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003268231 |
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| Protein GI | 262197022 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.133481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCAGCA CAGGCGTCCG CGAGTGTATA AACAGCCCGC GACTCTCCCT GGTAACTGGC
TCATCTATGT CCTTAGCGCG AAAAGCTGTA CATGGCGCCA TGTGGACGGT CGGTGCGAGC
CTCGGAGCTC GCGCCATCGG CCTCGTCGGC ACGGTGGTGA TCACGTATTT CCTCTCGCCC
ACCGTGGTCG CCGAGGTCAA CGCCGCCGCC ATTCTCGCCA TGTCGGCCAG TTTGCTCAGC
AATTTCGGCA TCGGCAACTA CTACATCGTC AAAGGTGATG ACCGCGAGGT CGCCTTCCAC
ATGACGGTGT ACAACCTTTT GCTCGGAGCC GTGGTTTTCG GCCTGGTATT GGCCTTTAAC
GAACCTCTGA GCGAGCTGCT GAATCTGCCC GCGATATCGG AGTTTGTCCC CGGTATGGTG
CTGGCCTGGT CCATCCGCCG CGTGGCCATG CAATCGCAAA AGGTGCTGGT GCGCGACATG
CGCTTCGGCC GCCTGAGCAT CGCGCGCGCG CTGGGTGAGA TTTCCTTCGT GCTCACCTCG
GTGGGTCTGG CCGCGCTCGA GTACGGCGGC ATGGCCATCG TCATCGGCAA CATCGTCCAG
TACTCGGTCG ACGGCGTCAT CACCATCACC TCGGTGCACT GGCGGACCTG GCTCGAGCCC
TGCAAATTGC GCTGGGAGCG CACTGTCGAC ATGTTCCGCT TCGGCTGGCC GCTGGGCGTC
AACGCCTTCG TCGGCTACGC CACGCATAGC TGGGACCGGC TGCTGTTCGC CAACCTGTTC
AACACCCACC TCATGGGTCT GTACAACTAT GCCTACCGCC TGGCCGAAAT ACCGGCCTCG
CAGGTGGGTG ACCAGATCAG CGACGTGCTG CTGCCGTCGA TGTCCAAGCT CGACGCCGAG
GGCCGCAAGC GCGCGCTCAT CCGCTCCACC GCCCTGCTGG GCGTGCTGCT GTTTCCGCTC
ACGGTCGGGC TGGCGGCCGT GGCCGAGCCG CTGATCACGC TGATCTTCGA CGAGGCCTGG
CACAGCACCG CGCCCATGGT GTCGGTGCTG GGCGCCTGCT TCGTGTTCGA GCCCATCGGC
AGCACCCTGG TCTCGTATCT GATGGCCCAG AGCCGCACGC GCACGCTCAT GATTCTGCAG
ATCATCAAGC TCGGCGCGCT GTTCGCCGGC ATGACCCTGC TGTCGACGCT GGGCCCGCTG
TGGGCGTGCG GCGGCGTCGG CGTCGGCTTC GCGGTCTACG GCTTGGTCAG CGCGTATCTG
TGCGTGCGCC GCGACAACAT CCCGGCCGGC AAGCTGCTGT CGGCCTTTGT CCAGCCGCTC
ACGGCCTGCG TGCCCATGGT CGGCGCGGTC CTGGGCGTGC GCTACGGGCT GCGCGCGGCC
GGCTTCGACA GCCCGGCGCT GTCGCTGGGA TGCGAGATCG TCGCGGGCGC CGCCGTGTAT
GTGCCCGCTG TGTTCCTGAC CGCGCCGGCG ACGGCGCGCG ACTTCCTCAG CCTGGTGCGC
AAGGCGCTCA AGCGCGGCGG CTGA
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| Protein sequence | MPSTGVRECI NSPRLSLVTG SSMSLARKAV HGAMWTVGAS LGARAIGLVG TVVITYFLSP
TVVAEVNAAA ILAMSASLLS NFGIGNYYIV KGDDREVAFH MTVYNLLLGA VVFGLVLAFN
EPLSELLNLP AISEFVPGMV LAWSIRRVAM QSQKVLVRDM RFGRLSIARA LGEISFVLTS
VGLAALEYGG MAIVIGNIVQ YSVDGVITIT SVHWRTWLEP CKLRWERTVD MFRFGWPLGV
NAFVGYATHS WDRLLFANLF NTHLMGLYNY AYRLAEIPAS QVGDQISDVL LPSMSKLDAE
GRKRALIRST ALLGVLLFPL TVGLAAVAEP LITLIFDEAW HSTAPMVSVL GACFVFEPIG
STLVSYLMAQ SRTRTLMILQ IIKLGALFAG MTLLSTLGPL WACGGVGVGF AVYGLVSAYL
CVRRDNIPAG KLLSAFVQPL TACVPMVGAV LGVRYGLRAA GFDSPALSLG CEIVAGAAVY
VPAVFLTAPA TARDFLSLVR KALKRGG
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